Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm7214-201ENSMUST00000222428 272 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm8858-201ENSMUST00000118259 342 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm23469-201ENSMUST00000157131 104 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm23829-201ENSMUST00000157392 270 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm23381-201ENSMUST00000157676 94 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm24770-201ENSMUST00000158505 92 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm25162-201ENSMUST00000158906 159 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm24418-201ENSMUST00000177597 79 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm22166-201ENSMUST00000178419 121 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm24639-201ENSMUST00000178518 79 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm23076-201ENSMUST00000179082 79 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm25077-201ENSMUST00000179157 79 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm23288-201ENSMUST00000179213 121 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm11392-201ENSMUST00000181419 710 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm27817-201ENSMUST00000184302 233 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm43680-201ENSMUST00000199466 340 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 AC158606.1-201ENSMUST00000220078 325 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 CT025538.2-201ENSMUST00000226083 772 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm15303-201ENSMUST00000118676 2624 ntBASIC2□□□□□ -2.09
Sf3b1Q99NB9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm12646-201ENSMUST00000119144 238 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm12304-201ENSMUST00000120312 385 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm25711-201ENSMUST00000158633 128 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm25368-201ENSMUST00000158847 131 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm23725-201ENSMUST00000177876 107 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm27755-201ENSMUST00000184623 132 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Trbv22-201ENSMUST00000191697 291 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm45730-201ENSMUST00000212560 395 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm26328-201ENSMUST00000082821 107 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Gm25794-201ENSMUST00000083286 107 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Sf3b1Q99NB9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm14894-201ENSMUST00000117170 270 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm14215-201ENSMUST00000120578 221 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm24901-201ENSMUST00000158125 110 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm23289-201ENSMUST00000175615 108 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Mir7679-201ENSMUST00000183379 63 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm38261-201ENSMUST00000192608 316 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm37449-201ENSMUST00000193016 270 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm18658-201ENSMUST00000195558 270 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm45071-201ENSMUST00000205353 571 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm44870-201ENSMUST00000207291 357 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm44910-201ENSMUST00000208451 396 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm22683-201ENSMUST00000082854 137 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm25859-201ENSMUST00000083710 91 ntBASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Sf3b1Q99NB9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm25938-201ENSMUST00000104139 166 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm22713-201ENSMUST00000116895 130 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm11358-201ENSMUST00000122310 373 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm25020-201ENSMUST00000178071 107 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm28151-201ENSMUST00000189404 951 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm42672-201ENSMUST00000197821 352 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm44142-201ENSMUST00000203358 311 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm18854-201ENSMUST00000211196 329 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms