Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lims1Q99JW4 Gm44563-201ENSMUST00000207958 178 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 Gm9174-201ENSMUST00000078149 255 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 Gm25930-201ENSMUST00000082785 107 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 Mir146-201ENSMUST00000083667 65 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Lims1Q99JW4 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.35□□□□□ -1.87
Lims1Q99JW4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm12458-201ENSMUST00000119387 495 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm12304-201ENSMUST00000120312 385 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm23713-201ENSMUST00000157353 70 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm22615-201ENSMUST00000158102 70 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm23365-201ENSMUST00000175019 125 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm25960-201ENSMUST00000175110 125 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm44453-201ENSMUST00000175161 126 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm25195-201ENSMUST00000177656 126 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm23816-201ENSMUST00000179617 132 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm37097-201ENSMUST00000193676 336 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm18429-201ENSMUST00000198707 421 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm45013-201ENSMUST00000206883 178 ntBASIC3.34□□□□□ -1.87
Lims1Q99JW4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Lims1Q99JW4 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.34□□□□□ -1.88
Lims1Q99JW4 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.34□□□□□ -1.88
Lims1Q99JW4 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm11982-201ENSMUST00000121480 314 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm25572-201ENSMUST00000157527 172 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm25494-201ENSMUST00000158143 100 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Mir5127-201ENSMUST00000175295 71 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm22120-201ENSMUST00000175590 70 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm37791-201ENSMUST00000195081 286 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Snord80-202ENSMUST00000199023 77 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Gm24966-201ENSMUST00000082443 79 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Mir384-201ENSMUST00000083565 88 ntBASIC3.33□□□□□ -1.88
Lims1Q99JW4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lims1Q99JW4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lims1Q99JW4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm24581-201ENSMUST00000103962 133 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm23532-201ENSMUST00000104569 112 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm5396-201ENSMUST00000121222 532 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm23540-201ENSMUST00000157543 164 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm24730-201ENSMUST00000158228 117 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm22889-201ENSMUST00000158639 58 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm27773-201ENSMUST00000184087 78 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm38238-201ENSMUST00000194334 346 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm18982-201ENSMUST00000198118 529 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm43746-201ENSMUST00000200028 317 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Mir721-201ENSMUST00000200230 88 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm44470-201ENSMUST00000203913 142 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm4036-201ENSMUST00000220842 626 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm22245-201ENSMUST00000082479 103 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Snord15a-201ENSMUST00000083888 148 ntBASIC3.32□□□□□ -1.88
Lims1Q99JW4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lims1Q99JW4 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Lims1Q99JW4 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm14562-201ENSMUST00000129885 543 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm24015-201ENSMUST00000157725 232 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm20399-201ENSMUST00000174652 132 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm27520-201ENSMUST00000184872 81 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm29104-201ENSMUST00000186304 222 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.31□□□□□ -1.88
Lims1Q99JW4 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm24762-201ENSMUST00000083689 104 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Gm10360-201ENSMUST00000097219 272 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.31□□□□□ -1.88
Lims1Q99JW4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms