Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm29635-201ENSMUST00000187221 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm29026-201ENSMUST00000187787 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28797-201ENSMUST00000188543 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28855-201ENSMUST00000188680 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28705-201ENSMUST00000189548 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28939-201ENSMUST00000190351 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28223-201ENSMUST00000190469 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm29092-201ENSMUST00000190768 315 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.53□□□□□ -2
Trim60Q8VI40 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm43884-201ENSMUST00000204251 559 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm7065-201ENSMUST00000222150 474 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.53□□□□□ -2
Trim60Q8VI40 Snord104-201ENSMUST00000083192 70 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm25628-201ENSMUST00000084002 105 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim60Q8VI40 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trim60Q8VI40 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim60Q8VI40 Gm7164-201ENSMUST00000117503 450 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm12934-201ENSMUST00000119221 343 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm16218-201ENSMUST00000155424 388 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm3852-201ENSMUST00000182781 264 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm43723-201ENSMUST00000196886 189 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm42578-201ENSMUST00000199960 194 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm44459-201ENSMUST00000203926 160 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm8940-201ENSMUST00000212585 219 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm45791-201ENSMUST00000212908 352 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Gm25578-201ENSMUST00000083406 104 ntBASIC2.52□□□□□ -2.01
Trim60Q8VI40 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Mir682-201ENSMUST00000102281 96 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm24582-201ENSMUST00000103967 103 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm13903-201ENSMUST00000120945 193 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm25808-201ENSMUST00000122784 284 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm23557-201ENSMUST00000157820 138 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm24056-201ENSMUST00000158617 146 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm26159-201ENSMUST00000158968 104 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm17065-201ENSMUST00000165245 239 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Mir3103-201ENSMUST00000175474 67 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Mir7050-201ENSMUST00000184636 60 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm27753-201ENSMUST00000184742 203 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm18356-201ENSMUST00000185677 623 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm29335-201ENSMUST00000188361 459 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gm45452-201ENSMUST00000210905 177 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.51□□□□□ -2.01
Trim60Q8VI40 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim60Q8VI40 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm42606-201ENSMUST00000114209 239 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Snord98-201ENSMUST00000116819 65 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm14269-201ENSMUST00000120455 306 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm22483-201ENSMUST00000157986 274 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim60Q8VI40 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm37054-201ENSMUST00000193481 543 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm34073-201ENSMUST00000195736 212 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm18453-201ENSMUST00000208000 626 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm22620-201ENSMUST00000082700 133 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm26056-201ENSMUST00000083043 104 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim60Q8VI40 Gm22365-201ENSMUST00000093750 117 ntBASIC2.5□□□□□ -2.01
Trim60Q8VI40 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm22782-201ENSMUST00000104082 132 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm24670-201ENSMUST00000104154 132 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm23829-201ENSMUST00000157392 270 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm22080-201ENSMUST00000157591 106 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm24601-201ENSMUST00000157970 143 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm22389-201ENSMUST00000158193 301 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm22947-201ENSMUST00000158559 91 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm22527-201ENSMUST00000158816 106 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Mir7014-201ENSMUST00000183853 63 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm28740-201ENSMUST00000186142 215 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm38050-201ENSMUST00000191904 238 ntBASIC2.49□□□□□ -2.01
Trim60Q8VI40 Gm43722-201ENSMUST00000196054 124 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms