Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm25155-201ENSMUST00000178450 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm24760-201ENSMUST00000178530 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm22285-201ENSMUST00000178576 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm22417-201ENSMUST00000178656 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l2-201ENSMUST00000178675 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm26270-201ENSMUST00000178690 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm23313-201ENSMUST00000178931 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm23089-201ENSMUST00000178947 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm24153-201ENSMUST00000179280 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm25597-201ENSMUST00000179388 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm25816-201ENSMUST00000179764 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm26188-201ENSMUST00000179963 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm26433-201ENSMUST00000180227 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm22128-201ENSMUST00000180346 94 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Mir6399-201ENSMUST00000184050 84 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Gm25128-201ENSMUST00000083339 76 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.41□□□□□ -2.34
Cspg4Q8VHY0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
Cspg4Q8VHY0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm26371-201ENSMUST00000157829 104 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm25335-201ENSMUST00000158043 103 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm22075-201ENSMUST00000158599 192 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm2966-201ENSMUST00000166052 481 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm17655-201ENSMUST00000167969 255 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm7871-201ENSMUST00000195346 618 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm9472-201ENSMUST00000221625 526 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Snora34-201ENSMUST00000083402 138 ntBASIC0.4□□□□□ -2.35
Cspg4Q8VHY0 Gm14774-201ENSMUST00000117857 536 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 AA413626-201ENSMUST00000121125 494 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm9001-201ENSMUST00000121642 399 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm24401-201ENSMUST00000157868 91 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm25333-201ENSMUST00000158035 246 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm17528-201ENSMUST00000171026 239 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm44910-201ENSMUST00000208451 396 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm14918-201ENSMUST00000118153 268 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm15312-201ENSMUST00000118827 271 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm22337-201ENSMUST00000157721 132 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Mir6372-201ENSMUST00000185114 109 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm8940-201ENSMUST00000212585 219 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm24018-201ENSMUST00000083232 107 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Mir151-201ENSMUST00000083678 68 ntBASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Cspg4Q8VHY0 Gm22779-201ENSMUST00000104085 107 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm13672-201ENSMUST00000117554 459 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm24419-201ENSMUST00000157875 332 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm24903-201ENSMUST00000158131 126 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm25944-201ENSMUST00000178758 94 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm14360-201ENSMUST00000120670 393 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm24382-201ENSMUST00000122698 107 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm3025-201ENSMUST00000163454 489 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm3111-201ENSMUST00000167426 490 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Mir6341-201ENSMUST00000183490 121 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm27588-201ENSMUST00000185096 263 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Mir6915-201ENSMUST00000198839 69 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm17991-201ENSMUST00000208139 297 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm45614-201ENSMUST00000209994 721 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm18113-201ENSMUST00000220630 303 ntBASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
Cspg4Q8VHY0 Mir804-201ENSMUST00000103251 95 ntBASIC0.37□□□□□ -2.35
Cspg4Q8VHY0 Gm14566-201ENSMUST00000118915 321 ntBASIC0.37□□□□□ -2.35
Cspg4Q8VHY0 Gm23463-201ENSMUST00000122468 99 ntBASIC0.37□□□□□ -2.35
Cspg4Q8VHY0 Gm17154-201ENSMUST00000165748 431 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms