Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm31230-201ENSMUST00000199725 785 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm29848-201ENSMUST00000203107 295 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm18774-201ENSMUST00000218269 601 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22299-201ENSMUST00000082663 136 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23454-201ENSMUST00000083332 133 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23010-201ENSMUST00000104151 126 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23983-201ENSMUST00000157142 114 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24198-201ENSMUST00000157812 108 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24419-201ENSMUST00000157875 332 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm16588-201ENSMUST00000162889 355 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Mir28b-201ENSMUST00000175399 80 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Mir7017-201ENSMUST00000184894 62 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28917-201ENSMUST00000187294 237 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28766-201ENSMUST00000191086 234 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm45590-201ENSMUST00000209715 262 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm46103-201ENSMUST00000217614 341 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24707-201ENSMUST00000082812 107 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22578-201ENSMUST00000083730 107 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm26175-201ENSMUST00000083794 131 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Ccdc28aQ8CEI3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm12304-201ENSMUST00000120312 385 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14713-201ENSMUST00000122362 686 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25012-201ENSMUST00000158396 164 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23568-201ENSMUST00000177960 92 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24829-201ENSMUST00000179245 92 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm27028-201ENSMUST00000182303 399 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm21673-201ENSMUST00000186640 436 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm21135-201ENSMUST00000189023 436 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm37162-201ENSMUST00000191708 551 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm37757-201ENSMUST00000193072 210 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25820-202ENSMUST00000197479 128 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm45207-201ENSMUST00000207469 145 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm18703-201ENSMUST00000215318 333 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26446-201ENSMUST00000082455 103 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22508-201ENSMUST00000082772 110 ntBASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ccdc28aQ8CEI3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24430-201ENSMUST00000104077 104 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm13356-201ENSMUST00000121678 335 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Mir1904-201ENSMUST00000122702 80 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25454-201ENSMUST00000157947 315 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm44754-201ENSMUST00000208155 400 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm45344-201ENSMUST00000211610 341 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25582-201ENSMUST00000083412 110 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Mir429-201ENSMUST00000083493 83 ntBASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Ccdc28aQ8CEI3 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14823-201ENSMUST00000117698 238 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14013-201ENSMUST00000119006 270 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm11849-201ENSMUST00000121293 261 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14765-201ENSMUST00000121954 326 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22597-201ENSMUST00000157602 80 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24439-201ENSMUST00000157894 117 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Zfp950-206ENSMUST00000178819 171 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm18356-201ENSMUST00000185677 623 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm37946-201ENSMUST00000192064 347 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Trbv24-201ENSMUST00000194614 347 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm42925-201ENSMUST00000197359 285 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms