Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm22886-201ENSMUST00000093714 107 ntBASIC2.42□□□□□ -2.02
Ccdc28bQ8CEG5 Gm22170-201ENSMUST00000097247 107 ntBASIC2.42□□□□□ -2.02
Ccdc28bQ8CEG5 Gm15844-201ENSMUST00000118016 576 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm13541-201ENSMUST00000119519 283 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm12071-201ENSMUST00000121968 469 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm22037-201ENSMUST00000157280 296 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm23704-201ENSMUST00000158844 340 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm24085-201ENSMUST00000175172 116 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm28717-201ENSMUST00000189950 315 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm7871-201ENSMUST00000195346 618 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm44161-201ENSMUST00000203532 253 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm34314-201ENSMUST00000203622 367 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm44858-201ENSMUST00000207360 154 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm23423-201ENSMUST00000082782 106 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm23412-201ENSMUST00000083017 107 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm26066-201ENSMUST00000083385 109 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.41□□□□□ -2.02
Ccdc28bQ8CEG5 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Ccdc28bQ8CEG5 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.4□□□□□ -2.02
Ccdc28bQ8CEG5 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23128-201ENSMUST00000104257 132 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13876-201ENSMUST00000118451 261 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm14551-201ENSMUST00000120802 256 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13903-201ENSMUST00000120945 193 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13424-201ENSMUST00000122301 354 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm22073-201ENSMUST00000122668 189 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm16510-201ENSMUST00000153501 249 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23779-201ENSMUST00000157938 64 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm24212-201ENSMUST00000158258 132 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm25162-201ENSMUST00000158906 159 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm6788-201ENSMUST00000166459 270 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm34073-201ENSMUST00000195736 212 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23128-202ENSMUST00000196578 133 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23851-201ENSMUST00000083831 103 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm25937-201ENSMUST00000083912 107 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.4□□□□□ -2.03
Ccdc28bQ8CEG5 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm22779-201ENSMUST00000104085 107 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13518-201ENSMUST00000120018 233 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm13862-201ENSMUST00000121220 197 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm15466-201ENSMUST00000122299 333 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm6956-201ENSMUST00000134724 546 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm26280-201ENSMUST00000157096 101 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm26275-201ENSMUST00000157101 268 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm22843-201ENSMUST00000157710 134 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm3852-201ENSMUST00000182781 264 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm28408-201ENSMUST00000191557 463 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm44083-201ENSMUST00000203114 337 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm44794-201ENSMUST00000206550 411 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm45815-201ENSMUST00000220241 146 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm24313-201ENSMUST00000082561 133 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23454-201ENSMUST00000083332 133 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm26164-201ENSMUST00000083793 104 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Gm22353-201ENSMUST00000083918 136 ntBASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc28bQ8CEG5 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm26154-201ENSMUST00000102339 96 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm25539-201ENSMUST00000116886 122 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm11854-201ENSMUST00000117839 446 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm12155-201ENSMUST00000121267 160 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm16358-201ENSMUST00000146046 210 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm22277-201ENSMUST00000157204 277 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm24481-201ENSMUST00000157210 102 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23588-201ENSMUST00000157659 99 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm24553-201ENSMUST00000158653 131 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm17187-201ENSMUST00000164622 410 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm23268-201ENSMUST00000175494 78 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm25121-201ENSMUST00000179846 79 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Mir6371-201ENSMUST00000184470 111 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm32033-201ENSMUST00000193483 339 ntBASIC2.38□□□□□ -2.03
Ccdc28bQ8CEG5 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms