Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 Gm22997-201ENSMUST00000082845 107 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 Mir350-201ENSMUST00000083639 99 ntBASIC1.25□□□□□ -2.21
Trub1Q8C0D0 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm25377-201ENSMUST00000104334 129 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm15309-201ENSMUST00000121644 240 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm6568-201ENSMUST00000122274 697 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm22338-201ENSMUST00000157715 129 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Mir3086-201ENSMUST00000175072 87 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm25035-201ENSMUST00000175414 77 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm28794-201ENSMUST00000185276 136 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm28688-201ENSMUST00000187301 268 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm37757-201ENSMUST00000193072 210 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm29848-201ENSMUST00000203107 295 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm45232-201ENSMUST00000207811 162 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm22620-201ENSMUST00000082700 133 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm23503-201ENSMUST00000083903 107 ntBASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trub1Q8C0D0 Gm26102-201ENSMUST00000157251 284 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm23752-201ENSMUST00000157584 115 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm26271-201ENSMUST00000158349 104 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Snord87-201ENSMUST00000175437 87 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm25451-201ENSMUST00000177832 121 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm25457-201ENSMUST00000179509 107 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm21978-201ENSMUST00000179696 377 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm10193-201ENSMUST00000188288 231 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Mir7118-201ENSMUST00000197760 61 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm7692-201ENSMUST00000213534 409 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Gm26263-201ENSMUST00000083281 164 ntBASIC1.23□□□□□ -2.21
Trub1Q8C0D0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Mir223-201ENSMUST00000102112 110 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm24439-201ENSMUST00000157894 117 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm27028-201ENSMUST00000182303 399 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm17991-201ENSMUST00000208139 297 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm19032-201ENSMUST00000208584 592 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Gm26175-201ENSMUST00000083794 131 ntBASIC1.22□□□□□ -2.21
Trub1Q8C0D0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm25938-201ENSMUST00000104139 166 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm14887-201ENSMUST00000119522 663 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm14678-201ENSMUST00000121396 482 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm14765-201ENSMUST00000121954 326 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm23429-201ENSMUST00000122486 149 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm25012-201ENSMUST00000158396 164 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm9022-202ENSMUST00000183285 483 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Mir6341-201ENSMUST00000183490 121 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm27898-201ENSMUST00000183987 80 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.21□□□□□ -2.22
Trub1Q8C0D0 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm22062-201ENSMUST00000082563 107 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.21□□□□□ -2.22
Trub1Q8C0D0 Mir687-201ENSMUST00000102166 89 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm23011-201ENSMUST00000104148 132 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Mir3098-201ENSMUST00000175416 87 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm22800-201ENSMUST00000175627 94 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm24168-201ENSMUST00000178825 107 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm25933-201ENSMUST00000178943 108 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm42509-201ENSMUST00000197390 781 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm31230-201ENSMUST00000199725 785 ntBASIC1.2□□□□□ -2.22
Trub1Q8C0D0 Gm44564-201ENSMUST00000207985 180 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 363.5 ms