Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm33866-201ENSMUST00000196911 289 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm25454-201ENSMUST00000157947 315 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm17377-201ENSMUST00000165184 207 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm25194-201ENSMUST00000177987 79 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm45387-201ENSMUST00000209792 632 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm15211-201ENSMUST00000118932 528 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm11248-201ENSMUST00000119568 201 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 AA413626-201ENSMUST00000121125 494 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm23956-201ENSMUST00000157211 119 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm23893-201ENSMUST00000158106 134 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm17085-201ENSMUST00000165425 502 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm4076-201ENSMUST00000179230 965 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm25156-201ENSMUST00000179809 79 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Mir6335-201ENSMUST00000184081 98 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm18775-201ENSMUST00000190763 586 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm36966-201ENSMUST00000192217 413 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm42647-201ENSMUST00000195939 459 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm45116-201ENSMUST00000207392 275 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.46□□□□□ -2.18
Usp47Q8BY87 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.46□□□□□ -2.18
Usp47Q8BY87 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Usp47Q8BY87 Gm22543-201ENSMUST00000104347 94 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Gm11845-201ENSMUST00000117886 327 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Gm15878-201ENSMUST00000127561 306 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Gm6660-201ENSMUST00000179149 468 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Gm23042-201ENSMUST00000083866 101 ntBASIC1.45□□□□□ -2.18
Usp47Q8BY87 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm14931-201ENSMUST00000111079 253 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm12393-201ENSMUST00000117084 848 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm2003-201ENSMUST00000118537 636 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm13903-201ENSMUST00000120945 193 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm2768-201ENSMUST00000121062 250 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm24839-201ENSMUST00000122602 107 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm2020-201ENSMUST00000145242 579 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Mir6540-201ENSMUST00000184886 108 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm45071-201ENSMUST00000205353 571 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm45730-201ENSMUST00000212560 395 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Usp47Q8BY87 Mir107-201ENSMUST00000083660 87 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Mir151-201ENSMUST00000083678 68 ntBASIC1.44□□□□□ -2.18
Usp47Q8BY87 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm25416-201ENSMUST00000104221 107 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm13378-201ENSMUST00000117483 336 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm14674-201ENSMUST00000117816 342 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm6829-201ENSMUST00000119858 360 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm22315-201ENSMUST00000158010 143 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm25711-201ENSMUST00000158633 128 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm25312-201ENSMUST00000178972 107 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm29231-201ENSMUST00000179850 319 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Mir6382-201ENSMUST00000184055 110 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Usp47Q8BY87 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm8125-201ENSMUST00000216602 738 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm24805-201ENSMUST00000082931 104 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 Mir19a-201ENSMUST00000083482 82 ntBASIC1.43□□□□□ -2.18
Usp47Q8BY87 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Usp47Q8BY87 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp47Q8BY87 Gm14852-201ENSMUST00000120065 647 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Gm23381-201ENSMUST00000157676 94 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Gm38154-201ENSMUST00000195444 340 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Snord43-201ENSMUST00000199549 108 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Gm42807-201ENSMUST00000200141 329 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Usp47Q8BY87 Gm26437-201ENSMUST00000082595 105 ntBASIC1.42□□□□□ -2.18
Usp47Q8BY87 Gm26147-201ENSMUST00000104479 114 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm14428-201ENSMUST00000120408 822 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm23713-201ENSMUST00000157353 70 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm22615-201ENSMUST00000158102 70 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm22389-201ENSMUST00000158193 301 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm24837-201ENSMUST00000158683 81 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm24677-201ENSMUST00000158755 150 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm7953-201ENSMUST00000168278 469 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms