Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.19□□□□□ -2.06
Nup54Q8BTS4 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.19□□□□□ -2.06
Nup54Q8BTS4 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.19□□□□□ -2.06
Nup54Q8BTS4 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.19□□□□□ -2.06
Nup54Q8BTS4 Gm19118-201ENSMUST00000222554 98 ntBASIC2.19□□□□□ -2.06
Nup54Q8BTS4 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nup54Q8BTS4 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm24582-201ENSMUST00000103967 103 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm16242-201ENSMUST00000117741 334 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm23641-201ENSMUST00000157857 101 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm33354-201ENSMUST00000195448 906 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm43510-201ENSMUST00000197922 353 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm43367-201ENSMUST00000199986 625 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.18□□□□□ -2.06
Nup54Q8BTS4 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm25402-201ENSMUST00000082966 131 ntBASIC2.18□□□□□ -2.06
Nup54Q8BTS4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm13331-201ENSMUST00000117500 448 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm11460-201ENSMUST00000118200 361 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm15211-201ENSMUST00000118932 528 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm15536-201ENSMUST00000121411 114 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm26102-201ENSMUST00000157251 284 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm24409-201ENSMUST00000157881 152 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm22328-201ENSMUST00000158074 112 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm23016-201ENSMUST00000158431 62 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm20102-201ENSMUST00000222445 220 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm22866-201ENSMUST00000083947 177 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Nup54Q8BTS4 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm11386-201ENSMUST00000117761 347 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm13153-201ENSMUST00000120969 637 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm13433-201ENSMUST00000121701 240 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm26149-201ENSMUST00000157432 108 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm24191-201ENSMUST00000157977 122 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm22891-201ENSMUST00000158641 164 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm7925-201ENSMUST00000166690 401 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm27317-201ENSMUST00000183533 95 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm37377-201ENSMUST00000191733 304 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm3867-201ENSMUST00000086108 279 ntBASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.16□□□□□ -2.06
Nup54Q8BTS4 Gm11512-201ENSMUST00000119669 663 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Gm15900-201ENSMUST00000161584 342 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Gm17148-201ENSMUST00000164702 249 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Mir3068-202ENSMUST00000197755 79 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Mir7232-201ENSMUST00000197929 74 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nup54Q8BTS4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm12550-201ENSMUST00000118478 329 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm14770-201ENSMUST00000122197 312 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24596-201ENSMUST00000122504 107 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm22227-201ENSMUST00000157356 259 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24419-201ENSMUST00000157875 332 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24584-201ENSMUST00000157972 107 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24577-201ENSMUST00000158580 63 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm19932-201ENSMUST00000177033 313 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm25211-201ENSMUST00000177553 107 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm24540-201ENSMUST00000177627 107 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm25256-201ENSMUST00000177746 107 ntBASIC2.14□□□□□ -2.07
Nup54Q8BTS4 Gm22822-201ENSMUST00000177941 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 120 ms