Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18971-201ENSMUST00000197240 374 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Mir3961-201ENSMUST00000198795 59 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm44533-201ENSMUST00000207782 268 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm44910-201ENSMUST00000208451 396 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm45754-201ENSMUST00000212380 279 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 AC154552.7-201ENSMUST00000222824 156 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm24598-201ENSMUST00000122510 74 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm16328-201ENSMUST00000126985 196 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm23983-201ENSMUST00000157142 114 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm24780-201ENSMUST00000157635 143 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm23641-201ENSMUST00000157857 101 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm23317-201ENSMUST00000157999 129 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm24333-201ENSMUST00000175101 84 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Mir6341-201ENSMUST00000183490 121 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm18775-201ENSMUST00000190763 586 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm37599-201ENSMUST00000193067 489 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm43739-201ENSMUST00000198294 307 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm43914-201ENSMUST00000203592 594 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm44881-201ENSMUST00000205425 367 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm18854-201ENSMUST00000211196 329 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm22572-201ENSMUST00000082985 105 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.99□□□□□ -2.09
Ccdc40Q8BI79 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm23172-201ENSMUST00000157160 124 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm23589-201ENSMUST00000157660 105 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm16162-201ENSMUST00000162296 297 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm23725-201ENSMUST00000177876 107 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm23963-201ENSMUST00000179603 77 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm9892-201ENSMUST00000182415 992 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Mir6950-201ENSMUST00000184438 73 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm43676-201ENSMUST00000197532 540 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm24165-201ENSMUST00000082718 128 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Snord7-201ENSMUST00000083781 97 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.98□□□□□ -2.09
Ccdc40Q8BI79 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm25090-201ENSMUST00000104000 132 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm26077-201ENSMUST00000104064 123 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm5396-201ENSMUST00000121222 532 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm15365-201ENSMUST00000122392 300 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm23124-201ENSMUST00000157650 107 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm24419-201ENSMUST00000157875 332 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm22768-201ENSMUST00000158366 153 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm22631-201ENSMUST00000179656 94 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm29657-201ENSMUST00000189807 342 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm17990-201ENSMUST00000211728 553 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm22299-201ENSMUST00000082663 136 ntBASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc40Q8BI79 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm13672-201ENSMUST00000117554 459 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm15536-201ENSMUST00000121411 114 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm24478-201ENSMUST00000157439 158 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm22843-201ENSMUST00000157710 134 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm17161-201ENSMUST00000169187 524 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Mir6901-201ENSMUST00000185062 62 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm37550-201ENSMUST00000193230 463 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Trbv7-201ENSMUST00000193339 402 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm44128-201ENSMUST00000204909 219 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.96□□□□□ -2.1
Ccdc40Q8BI79 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm15010-201ENSMUST00000117153 407 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm14785-201ENSMUST00000120185 539 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm22603-201ENSMUST00000157603 96 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Snord87-201ENSMUST00000175437 87 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms