Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm45150-201ENSMUST00000206051 467 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm44666-201ENSMUST00000208544 391 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm26126-201ENSMUST00000083188 164 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Mir10a-201ENSMUST00000083585 110 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm13432-201ENSMUST00000118861 241 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm7916-201ENSMUST00000120325 456 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm23172-201ENSMUST00000157160 124 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm22768-201ENSMUST00000158366 153 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm25836-201ENSMUST00000158918 123 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Mir6341-201ENSMUST00000183490 121 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm25820-202ENSMUST00000197479 128 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Mir3961-201ENSMUST00000198795 59 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm44011-201ENSMUST00000203336 394 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm23462-201ENSMUST00000083264 104 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm10360-201ENSMUST00000097219 272 ntBASIC1.53□□□□□ -2.16
Clrn3Q8BHH8 Gm26377-201ENSMUST00000102184 108 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm8858-201ENSMUST00000118259 342 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm14638-201ENSMUST00000121338 216 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm22338-201ENSMUST00000157715 129 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm7953-201ENSMUST00000168278 469 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm22800-201ENSMUST00000175627 94 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Zfp950-206ENSMUST00000178819 171 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm28383-201ENSMUST00000187563 139 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm29262-201ENSMUST00000190084 196 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm37579-201ENSMUST00000194291 142 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm8747-201ENSMUST00000195392 751 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm7692-201ENSMUST00000213534 409 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Gm25404-201ENSMUST00000082970 107 ntBASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.52□□□□□ -2.17
Clrn3Q8BHH8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm15010-201ENSMUST00000117153 407 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm3788-201ENSMUST00000119949 136 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm23829-201ENSMUST00000157392 270 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm24885-201ENSMUST00000158783 270 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm9593-201ENSMUST00000166034 469 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm24862-201ENSMUST00000179103 79 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm23310-201ENSMUST00000179105 79 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm25461-201ENSMUST00000179293 79 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm29950-201ENSMUST00000195273 237 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm44449-201ENSMUST00000203610 153 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm26228-201ENSMUST00000082512 107 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm25080-201ENSMUST00000082526 107 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Mir429-201ENSMUST00000083493 83 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Gm25518-201ENSMUST00000083864 107 ntBASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Clrn3Q8BHH8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Mir223-201ENSMUST00000102112 110 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm14624-201ENSMUST00000117746 192 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm12370-201ENSMUST00000117809 604 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm12372-201ENSMUST00000121654 768 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm24481-201ENSMUST00000157210 102 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm25012-201ENSMUST00000158396 164 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm24177-201ENSMUST00000158927 131 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm24388-201ENSMUST00000177872 107 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm23145-201ENSMUST00000178912 79 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm28404-201ENSMUST00000190242 453 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm43676-201ENSMUST00000197532 540 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm17990-201ENSMUST00000211728 553 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm18617-201ENSMUST00000222311 259 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.5□□□□□ -2.17
Clrn3Q8BHH8 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm22831-201ENSMUST00000102473 109 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm23951-201ENSMUST00000104029 132 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm13439-201ENSMUST00000117541 409 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm14402-201ENSMUST00000122217 508 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm25392-201ENSMUST00000157335 297 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm23331-201ENSMUST00000157423 108 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm22316-201ENSMUST00000158012 216 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Gm25413-201ENSMUST00000158544 312 ntBASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Clrn3Q8BHH8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms