Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm24671-201ENSMUST00000104159 158 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm24282-201ENSMUST00000104232 66 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm15466-201ENSMUST00000122299 333 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm12443-201ENSMUST00000122308 323 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Mir1898-201ENSMUST00000122643 83 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm26088-201ENSMUST00000157896 131 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm24878-201ENSMUST00000158782 104 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm4468-201ENSMUST00000170206 294 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm20923-201ENSMUST00000190009 319 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm21088-201ENSMUST00000190875 316 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm7065-201ENSMUST00000222150 474 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm9318-201ENSMUST00000222444 438 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm26314-201ENSMUST00000083891 107 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm26329-201ENSMUST00000093723 110 ntBASIC2.94□□□□□ -1.94
Ubfd1Q78JW9 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm26500-201ENSMUST00000101867 106 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm25407-201ENSMUST00000104102 134 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm25315-201ENSMUST00000116823 121 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm8292-201ENSMUST00000162574 396 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm17065-201ENSMUST00000165245 239 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm28629-201ENSMUST00000187309 263 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm28358-202ENSMUST00000189292 223 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm28951-201ENSMUST00000190742 313 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm44337-201ENSMUST00000196553 114 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm44393-201ENSMUST00000197418 138 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm24350-202ENSMUST00000198309 132 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm44960-201ENSMUST00000207403 141 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm45288-201ENSMUST00000210236 151 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Gm22249-201ENSMUST00000082485 136 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ubfd1Q78JW9 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm22270-201ENSMUST00000104034 132 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm15211-201ENSMUST00000118932 528 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm24847-201ENSMUST00000158032 108 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm24846-201ENSMUST00000158033 108 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm17100-201ENSMUST00000168963 272 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm25956-201ENSMUST00000175115 217 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm42570-201ENSMUST00000195937 292 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm4945-201ENSMUST00000075152 453 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm25793-201ENSMUST00000083287 107 ntBASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ubfd1Q78JW9 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm14073-201ENSMUST00000117344 381 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm27396-201ENSMUST00000157708 58 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm23921-201ENSMUST00000175258 107 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm22114-201ENSMUST00000177756 107 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm43286-201ENSMUST00000197420 424 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm43600-201ENSMUST00000202134 223 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm44010-201ENSMUST00000204432 331 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm23679-201ENSMUST00000083161 119 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Mir184-201ENSMUST00000083662 69 ntBASIC2.91□□□□□ -1.94
Ubfd1Q78JW9 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms