Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm26186-201ENSMUST00000157689 125 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm24358-201ENSMUST00000158424 288 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm8338-201ENSMUST00000163928 363 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm6788-201ENSMUST00000166459 270 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm27786-201ENSMUST00000184337 70 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm37807-201ENSMUST00000194310 190 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm43680-201ENSMUST00000199466 340 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm45119-201ENSMUST00000207612 199 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm25199-201ENSMUST00000083095 104 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm11460-201ENSMUST00000118200 361 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm16533-201ENSMUST00000140035 228 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm25909-201ENSMUST00000157619 121 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm24853-201ENSMUST00000158026 121 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm15900-201ENSMUST00000161584 342 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm24816-201ENSMUST00000175311 151 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Mir7068-201ENSMUST00000183439 74 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm44844-201ENSMUST00000207242 336 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 Gm10264-201ENSMUST00000220589 429 ntBASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Smarca1Q6PGB8 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm650-201ENSMUST00000144428 1551 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm6954-201ENSMUST00000117416 225 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm27396-201ENSMUST00000157708 58 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm22654-201ENSMUST00000157874 105 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm24085-201ENSMUST00000175172 116 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm23190-201ENSMUST00000180307 64 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm43739-201ENSMUST00000198294 307 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm44478-201ENSMUST00000204875 114 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm45704-201ENSMUST00000212582 403 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm5023-201ENSMUST00000217442 587 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm45815-201ENSMUST00000220241 146 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm25801-201ENSMUST00000082638 106 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm26457-201ENSMUST00000082678 78 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm22364-201ENSMUST00000083097 98 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
Smarca1Q6PGB8 Gm24172-201ENSMUST00000104127 117 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm25054-201ENSMUST00000157370 97 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm24436-201ENSMUST00000157889 302 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm24922-201ENSMUST00000158511 102 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm16232-201ENSMUST00000162856 167 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm20718-201ENSMUST00000176058 259 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm20660-201ENSMUST00000177515 289 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm27761-201ENSMUST00000184091 131 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm28090-201ENSMUST00000189458 664 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm38311-201ENSMUST00000192945 165 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Mir3068-202ENSMUST00000197755 79 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm33654-201ENSMUST00000221704 215 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm21937-201ENSMUST00000222825 218 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm24623-201ENSMUST00000082616 194 ntBASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Smarca1Q6PGB8 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Smarca1Q6PGB8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Smarca1Q6PGB8 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm24338-201ENSMUST00000104205 127 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Mir466k-201ENSMUST00000116774 122 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm12443-201ENSMUST00000122308 323 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm22791-201ENSMUST00000157232 145 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm22435-201ENSMUST00000158552 128 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm22664-201ENSMUST00000158719 105 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Gm25121-201ENSMUST00000179846 79 ntBASIC2.9□□□□□ -1.95
Smarca1Q6PGB8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms