Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Rnf220Q6PDX6 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm25875-201ENSMUST00000104323 107 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm12550-201ENSMUST00000118478 329 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm22204-201ENSMUST00000122654 327 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm10357-201ENSMUST00000159886 264 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm43193-201ENSMUST00000197732 441 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm42578-201ENSMUST00000199960 194 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm45365-201ENSMUST00000209489 256 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm9712-201ENSMUST00000210842 311 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm2829-201ENSMUST00000213121 499 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm25480-201ENSMUST00000083217 133 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Rny1-201ENSMUST00000083767 112 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm24522-201ENSMUST00000083964 108 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.14□□□□□ -1.91
Rnf220Q6PDX6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Mir1b-201ENSMUST00000117012 122 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm26479-201ENSMUST00000122620 106 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm23542-201ENSMUST00000158208 96 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm27834-201ENSMUST00000183427 125 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Mir7074-201ENSMUST00000183884 63 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Mir6899-201ENSMUST00000184798 64 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm44977-201ENSMUST00000205283 420 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm46233-201ENSMUST00000217831 449 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm22294-201ENSMUST00000083308 104 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rnf220Q6PDX6 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm24125-201ENSMUST00000104105 137 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm9009-201ENSMUST00000117321 326 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm11253-201ENSMUST00000118486 201 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm28010-201ENSMUST00000179485 126 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm25457-201ENSMUST00000179509 107 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm27402-201ENSMUST00000183890 120 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Mir6399-201ENSMUST00000184050 84 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm6060-201ENSMUST00000188671 251 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Trbv6-201ENSMUST00000193743 276 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm22358-201ENSMUST00000082877 122 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm25188-201ENSMUST00000083913 122 ntBASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf220Q6PDX6 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm24911-201ENSMUST00000157292 136 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm23671-201ENSMUST00000157472 103 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm7592-201ENSMUST00000160674 627 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm7582-201ENSMUST00000160831 603 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm26219-201ENSMUST00000175216 71 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm26426-201ENSMUST00000177866 123 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Spin2g-201ENSMUST00000178425 687 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm26060-201ENSMUST00000180094 123 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm28002-201ENSMUST00000184832 100 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Mir6933-201ENSMUST00000184982 81 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm37586-201ENSMUST00000193654 204 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm45796-201ENSMUST00000212483 114 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm23040-201ENSMUST00000083869 163 ntBASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Rnf220Q6PDX6 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.1□□□□□ -1.91
Rnf220Q6PDX6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Rnf220Q6PDX6 Gm26418-201ENSMUST00000104275 137 ntBASIC3.1□□□□□ -1.91
Rnf220Q6PDX6 Gm12513-201ENSMUST00000118617 352 ntBASIC3.1□□□□□ -1.91
Rnf220Q6PDX6 Gm15026-201ENSMUST00000119219 458 ntBASIC3.1□□□□□ -1.91
Rnf220Q6PDX6 Gm11704-201ENSMUST00000120031 214 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms