Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm15536-201ENSMUST00000121411 114 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm23169-201ENSMUST00000157157 112 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm24601-201ENSMUST00000157970 143 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm16232-201ENSMUST00000162856 167 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm26180-201ENSMUST00000179942 107 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm28740-201ENSMUST00000186142 215 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm44149-201ENSMUST00000204256 226 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Hmgb4Q6P8W9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm12617-201ENSMUST00000121268 381 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm7209-201ENSMUST00000122339 333 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm23829-201ENSMUST00000157392 270 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm25162-201ENSMUST00000158906 159 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm23191-201ENSMUST00000179147 107 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm43600-201ENSMUST00000202134 223 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm44459-201ENSMUST00000203926 160 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm45678-201ENSMUST00000210509 295 ntBASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb4Q6P8W9 Gm14602-201ENSMUST00000118625 340 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm14843-201ENSMUST00000119596 212 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm22328-201ENSMUST00000158074 112 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm26159-201ENSMUST00000158968 104 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm24084-201ENSMUST00000175173 137 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm27761-201ENSMUST00000184091 131 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm43510-201ENSMUST00000197922 353 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm44844-201ENSMUST00000207242 336 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm26056-201ENSMUST00000083043 104 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm23242-201ENSMUST00000083055 107 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm25199-201ENSMUST00000083095 104 ntBASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hmgb4Q6P8W9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm12934-201ENSMUST00000119221 343 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm24846-201ENSMUST00000158033 108 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm22382-201ENSMUST00000158185 130 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm37054-201ENSMUST00000193481 543 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm24043-201ENSMUST00000083108 116 ntBASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
Hmgb4Q6P8W9 Gm25485-201ENSMUST00000104120 132 ntBASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm13457-201ENSMUST00000117885 267 ntBASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm15211-201ENSMUST00000118932 528 ntBASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Gm26968-201ENSMUST00000182894 481 ntBASIC2.49□□□□□ -2.01
Hmgb4Q6P8W9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms