Protein–RNA interactions for Protein: Q62226

Shh, Sonic hedgehog protein, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShhQ62226 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ShhQ62226 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ShhQ62226 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
ShhQ62226 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ShhQ62226 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.88□□□□□ -1.95
ShhQ62226 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ShhQ62226 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
ShhQ62226 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
ShhQ62226 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ShhQ62226 Gm25485-201ENSMUST00000104120 132 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm25728-201ENSMUST00000104525 159 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm13439-201ENSMUST00000117541 409 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm24914-201ENSMUST00000157285 313 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm25956-201ENSMUST00000175115 217 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm37162-201ENSMUST00000191708 551 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm19177-201ENSMUST00000204520 613 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm44157-201ENSMUST00000204720 410 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm8940-201ENSMUST00000212585 219 ntBASIC2.87□□□□□ -1.95
ShhQ62226 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm26447-201ENSMUST00000082448 129 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm22507-201ENSMUST00000082773 160 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm25202-201ENSMUST00000082838 191 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Gm23727-201ENSMUST00000083352 164 ntBASIC2.87□□□□□ -1.95
ShhQ62226 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
ShhQ62226 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ShhQ62226 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
ShhQ62226 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ShhQ62226 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ShhQ62226 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ShhQ62226 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.86□□□□□ -1.95
ShhQ62226 Gm12647-201ENSMUST00000118977 265 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.86□□□□□ -1.95
ShhQ62226 Gm24858-201ENSMUST00000158058 323 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Gm27893-201ENSMUST00000184408 194 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ShhQ62226 Gm18000-201ENSMUST00000212153 800 ntBASIC2.86□□□□□ -1.95
ShhQ62226 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.86□□□□□ -1.95
ShhQ62226 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.86□□□□□ -1.95
ShhQ62226 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.86□□□□□ -1.95
ShhQ62226 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.86□□□□□ -1.95
ShhQ62226 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Gm22979-201ENSMUST00000082609 159 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Gm22620-201ENSMUST00000082700 133 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Snord14d-201ENSMUST00000083424 86 ntBASIC2.86□□□□□ -1.95
ShhQ62226 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ShhQ62226 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ShhQ62226 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
ShhQ62226 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ShhQ62226 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Mir693-201ENSMUST00000102187 89 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Gm22766-201ENSMUST00000158372 99 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm17100-201ENSMUST00000168963 272 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm24084-201ENSMUST00000175173 137 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm24487-201ENSMUST00000178017 63 ntBASIC2.85□□□□□ -1.95
ShhQ62226 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ShhQ62226 Gm43239-201ENSMUST00000200131 201 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm43914-201ENSMUST00000203592 594 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm44960-201ENSMUST00000207403 141 ntBASIC2.85□□□□□ -1.95
ShhQ62226 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.85□□□□□ -1.95
ShhQ62226 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.85□□□□□ -1.95
ShhQ62226 Mir137-201ENSMUST00000083635 73 ntBASIC2.85□□□□□ -1.95
ShhQ62226 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ShhQ62226 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
ShhQ62226 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.85□□□□□ -1.95
ShhQ62226 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
ShhQ62226 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
ShhQ62226 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
ShhQ62226 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
ShhQ62226 Gm23941-201ENSMUST00000101953 107 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm13329-201ENSMUST00000117063 265 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm12954-201ENSMUST00000118610 611 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm13725-201ENSMUST00000122139 207 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm22322-201ENSMUST00000157151 111 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm23759-201ENSMUST00000158351 268 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm22114-201ENSMUST00000177756 107 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Mir7068-201ENSMUST00000183439 74 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm29147-201ENSMUST00000186846 315 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm29227-201ENSMUST00000187139 315 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm29034-201ENSMUST00000188099 315 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm28160-201ENSMUST00000191229 315 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm37129-201ENSMUST00000195791 315 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm43510-201ENSMUST00000197922 353 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Gm35931-201ENSMUST00000203931 448 ntBASIC2.84□□□□□ -1.95
ShhQ62226 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
ShhQ62226 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.84□□□□□ -1.95
ShhQ62226 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.84□□□□□ -1.95
ShhQ62226 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.84□□□□□ -1.95
ShhQ62226 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms