Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CtcfQ61164 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CtcfQ61164 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CtcfQ61164 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CtcfQ61164 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CtcfQ61164 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CtcfQ61164 Gm22270-201ENSMUST00000104034 132 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm25565-201ENSMUST00000104605 105 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CtcfQ61164 Gm13439-201ENSMUST00000117541 409 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm14843-201ENSMUST00000119596 212 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm24082-201ENSMUST00000175175 83 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm27694-201ENSMUST00000184740 86 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm27700-201ENSMUST00000185003 81 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm18341-201ENSMUST00000197538 622 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.01□□□□□ -1.93
CtcfQ61164 Gm18000-201ENSMUST00000212153 800 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm26447-201ENSMUST00000082448 129 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm22247-201ENSMUST00000082476 131 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Gm23721-201ENSMUST00000083005 107 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Mir452-201ENSMUST00000093629 85 ntBASIC3.01□□□□□ -1.93
CtcfQ61164 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CtcfQ61164 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CtcfQ61164 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3□□□□□ -1.93
CtcfQ61164 Gm22779-201ENSMUST00000104085 107 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm15106-201ENSMUST00000119691 821 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm12155-201ENSMUST00000121267 160 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3□□□□□ -1.93
CtcfQ61164 Gm23559-201ENSMUST00000157824 103 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm17072-201ENSMUST00000166673 658 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm26400-201ENSMUST00000175012 85 ntBASIC3□□□□□ -1.93
CtcfQ61164 Gm27624-201ENSMUST00000185047 177 ntBASIC3□□□□□ -1.93
CtcfQ61164 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3□□□□□ -1.93
CtcfQ61164 AC126440.1-201ENSMUST00000227098 349 ntBASIC3□□□□□ -1.93
CtcfQ61164 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
CtcfQ61164 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CtcfQ61164 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CtcfQ61164 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CtcfQ61164 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CtcfQ61164 Gm23060-201ENSMUST00000102345 109 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm14841-201ENSMUST00000121067 758 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CtcfQ61164 Gm17187-201ENSMUST00000164622 410 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm17062-201ENSMUST00000166987 461 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm29397-201ENSMUST00000185205 333 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.99□□□□□ -1.93
CtcfQ61164 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.99□□□□□ -1.93
CtcfQ61164 Gm6059-201ENSMUST00000196903 340 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm44964-201ENSMUST00000207011 273 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.99□□□□□ -1.93
CtcfQ61164 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Gm23727-201ENSMUST00000083352 164 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CtcfQ61164 Gm24817-201ENSMUST00000093672 105 ntBASIC2.99□□□□□ -1.93
CtcfQ61164 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CtcfQ61164 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CtcfQ61164 Gm23941-201ENSMUST00000101953 107 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
CtcfQ61164 Gm13378-201ENSMUST00000117483 336 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm11936-201ENSMUST00000118323 160 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm12071-201ENSMUST00000121968 469 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.98□□□□□ -1.93
CtcfQ61164 Gm25392-201ENSMUST00000157335 297 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm24858-201ENSMUST00000158058 323 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Mir6916-201ENSMUST00000184514 63 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29512-201ENSMUST00000185544 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28110-201ENSMUST00000185782 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm19257-201ENSMUST00000186121 183 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28838-201ENSMUST00000186338 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29057-201ENSMUST00000186468 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29661-201ENSMUST00000186781 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28737-201ENSMUST00000186808 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29118-201ENSMUST00000186908 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28433-201ENSMUST00000187085 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29635-201ENSMUST00000187221 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28759-201ENSMUST00000187621 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28831-201ENSMUST00000187739 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28200-201ENSMUST00000187778 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29026-201ENSMUST00000187787 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28752-201ENSMUST00000188340 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28797-201ENSMUST00000188543 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28855-201ENSMUST00000188680 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29378-201ENSMUST00000188723 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28569-201ENSMUST00000188748 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28120-201ENSMUST00000188812 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28369-201ENSMUST00000188993 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29037-201ENSMUST00000189092 313 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28909-201ENSMUST00000189406 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28705-201ENSMUST00000189548 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28861-201ENSMUST00000189681 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29180-201ENSMUST00000190003 315 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms