Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm22535-201ENSMUST00000158174 119 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm20689-201ENSMUST00000176033 279 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Mir6352-201ENSMUST00000184495 116 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm8151-201ENSMUST00000184817 871 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm29073-201ENSMUST00000185563 664 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm18185-201ENSMUST00000186725 667 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm29165-201ENSMUST00000190655 664 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm29211-201ENSMUST00000191470 664 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm43510-201ENSMUST00000197922 353 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm44142-201ENSMUST00000203358 311 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm24044-201ENSMUST00000083107 156 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Usf1Q61069 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Usf1Q61069 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Usf1Q61069 Gm14774-201ENSMUST00000117857 536 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm14748-201ENSMUST00000119819 411 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm13409-201ENSMUST00000122072 546 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm25052-201ENSMUST00000122661 158 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm26280-201ENSMUST00000157096 101 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm22554-201ENSMUST00000157798 147 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm22891-201ENSMUST00000158641 164 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm25163-201ENSMUST00000158905 104 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Usf1Q61069 Mir7j-201ENSMUST00000184427 122 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm27919-201ENSMUST00000185163 107 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm37162-201ENSMUST00000191708 551 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.85□□□□□ -2.11
Usf1Q61069 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Usf1Q61069 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.85□□□□□ -2.11
Usf1Q61069 Gm6109-201ENSMUST00000223297 348 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.85□□□□□ -2.11
Usf1Q61069 Gm26108-201ENSMUST00000083973 191 ntBASIC1.85□□□□□ -2.11
Usf1Q61069 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Usf1Q61069 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.84□□□□□ -2.11
Usf1Q61069 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm8858-201ENSMUST00000118259 342 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm25454-201ENSMUST00000157947 315 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Snord11-201ENSMUST00000158468 84 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm26024-201ENSMUST00000158657 322 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm25162-201ENSMUST00000158906 159 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm25996-201ENSMUST00000175393 117 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm23725-201ENSMUST00000177876 107 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm29231-201ENSMUST00000179850 319 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm37557-201ENSMUST00000191640 139 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm44182-201ENSMUST00000204052 115 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 Gm23246-201ENSMUST00000083371 67 ntBASIC1.84□□□□□ -2.11
Usf1Q61069 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.84□□□□□ -2.11
Usf1Q61069 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.84□□□□□ -2.12
Usf1Q61069 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Usf1Q61069 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Usf1Q61069 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Mdga2-203ENSMUST00000113942 423 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm13432-201ENSMUST00000118861 241 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm16510-201ENSMUST00000153501 249 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm23000-201ENSMUST00000157083 139 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm26393-201ENSMUST00000157625 129 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm23714-201ENSMUST00000179259 105 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Usf1Q61069 Gm23379-201ENSMUST00000180026 107 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm27957-201ENSMUST00000184054 127 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Mir6376-201ENSMUST00000185149 131 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.83□□□□□ -2.12
Usf1Q61069 Gm37658-201ENSMUST00000192672 315 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm9251-201ENSMUST00000197202 628 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm44870-201ENSMUST00000207291 357 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm44910-201ENSMUST00000208451 396 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Gm18991-201ENSMUST00000209225 746 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Usf1Q61069 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Mir93-201ENSMUST00000083593 88 ntBASIC1.83□□□□□ -2.12
Usf1Q61069 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Usf1Q61069 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Usf1Q61069 Gm14670-201ENSMUST00000117327 337 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm23829-201ENSMUST00000157392 270 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm23324-201ENSMUST00000157421 131 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm24438-201ENSMUST00000157893 115 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm22727-201ENSMUST00000158090 116 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm22841-201ENSMUST00000158443 62 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Usf1Q61069 Mir7016-201ENSMUST00000184308 72 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms