Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm17966-201ENSMUST00000193453 594 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 AC154296.1-201ENSMUST00000198150 67 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm43427-201ENSMUST00000198188 331 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm45907-201ENSMUST00000213023 193 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 AC121942.2-201ENSMUST00000223824 600 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 AL645546.1-201ENSMUST00000225001 189 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm43875-201ENSMUST00000203319 2475 ntBASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Gm37097-201ENSMUST00000193676 336 ntBASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Gm45543-201ENSMUST00000209327 88 ntBASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 AC141895.1-201ENSMUST00000218141 273 ntBASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Gm42993-201ENSMUST00000196856 7325 ntBASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scaf1Q5U4C3 Gm23472-201ENSMUST00000101806 191 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm22217-201ENSMUST00000157556 313 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm7592-201ENSMUST00000160674 627 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm7582-201ENSMUST00000160831 603 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm17052-201ENSMUST00000165496 289 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm24497-201ENSMUST00000177868 191 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm21827-201ENSMUST00000178247 423 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm25935-201ENSMUST00000178746 107 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 Gm23444-201ENSMUST00000082922 191 ntBASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scaf1Q5U4C3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm25272-201ENSMUST00000104293 128 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm24908-201ENSMUST00000157294 127 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm27753-201ENSMUST00000184742 203 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm44294-201ENSMUST00000205090 728 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm45002-201ENSMUST00000208045 120 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm19790-201ENSMUST00000214414 251 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf1Q5U4C3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm22590-201ENSMUST00000104247 128 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm14215-201ENSMUST00000120578 221 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm23865-201ENSMUST00000157723 97 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm23666-201ENSMUST00000158053 116 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm27271-201ENSMUST00000183509 170 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm27761-201ENSMUST00000184091 131 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm10212-201ENSMUST00000087884 324 ntBASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf1Q5U4C3 Gm37176-201ENSMUST00000193300 4051 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Gm23322-201ENSMUST00000104464 167 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Snord19-201ENSMUST00000104609 76 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Gm24244-201ENSMUST00000157317 130 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Gm24008-201ENSMUST00000157733 138 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Gm25015-201ENSMUST00000158400 128 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Mir6402-201ENSMUST00000183406 80 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 AC122484.1-201ENSMUST00000221578 177 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 AC140397.1-201ENSMUST00000225563 4562 ntBASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scaf1Q5U4C3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm14652-201ENSMUST00000118479 235 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm23466-201ENSMUST00000157133 106 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm22883-201ENSMUST00000157376 106 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm22380-201ENSMUST00000157479 95 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Mir1934-201ENSMUST00000158127 83 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm17166-201ENSMUST00000172006 431 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Mir6938-201ENSMUST00000184173 63 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm37281-201ENSMUST00000192412 439 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm38183-201ENSMUST00000193189 205 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms