Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22130-201ENSMUST00000179979 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm22393-201ENSMUST00000180153 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm25085-201ENSMUST00000180298 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm37693-201ENSMUST00000194562 234 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm35736-201ENSMUST00000203681 313 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm25851-201ENSMUST00000082794 107 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm23517-201ENSMUST00000082830 192 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm23336-201ENSMUST00000117023 123 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm15193-201ENSMUST00000120224 865 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm24598-201ENSMUST00000122510 74 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm25663-201ENSMUST00000157698 135 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm25011-201ENSMUST00000158398 126 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm22929-201ENSMUST00000175517 107 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm37399-201ENSMUST00000195224 416 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm44326-201ENSMUST00000198226 101 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm29754-201ENSMUST00000206269 358 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm19709-201ENSMUST00000215403 482 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm18696-201ENSMUST00000220103 274 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm46994-201ENSMUST00000221523 219 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm20102-201ENSMUST00000222445 220 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 CT025552.1-201ENSMUST00000224561 521 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.36□□□□□ -2.35
Trav3-1Q5R1I8 Gm12897-201ENSMUST00000120341 250 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm24839-201ENSMUST00000122602 107 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm20438-201ENSMUST00000174441 329 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm29490-201ENSMUST00000190923 342 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm29288-201ENSMUST00000191582 901 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm36966-201ENSMUST00000192217 413 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm44961-201ENSMUST00000207450 196 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm18252-203ENSMUST00000215855 757 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm9795-201ENSMUST00000062156 693 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm23454-201ENSMUST00000083332 133 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.35□□□□□ -2.35
Trav3-1Q5R1I8 Gm22750-201ENSMUST00000102076 103 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm26342-201ENSMUST00000104557 129 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm14013-201ENSMUST00000119006 270 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm23206-201ENSMUST00000122720 184 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm24401-201ENSMUST00000157868 91 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm16038-201ENSMUST00000159317 193 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm27420-201ENSMUST00000183823 79 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm23370-201ENSMUST00000199545 130 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm44232-201ENSMUST00000204537 225 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm46103-201ENSMUST00000217614 341 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Snord33-201ENSMUST00000083694 84 ntBASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trav3-1Q5R1I8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm22488-201ENSMUST00000116811 127 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm23858-201ENSMUST00000158384 106 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm16584-201ENSMUST00000159267 189 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm22510-201ENSMUST00000179304 79 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm26336-201ENSMUST00000179449 79 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm26390-201ENSMUST00000179628 79 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm44320-201ENSMUST00000199276 86 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Gm44830-201ENSMUST00000207667 584 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.33□□□□□ -2.36
Trav3-1Q5R1I8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm24579-201ENSMUST00000103964 144 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm14624-201ENSMUST00000117746 192 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm13502-201ENSMUST00000121574 684 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm15365-201ENSMUST00000122392 300 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Mir3098-201ENSMUST00000175416 87 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm20613-201ENSMUST00000175828 345 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm38044-201ENSMUST00000192964 487 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Mir378a-201ENSMUST00000198300 66 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm45912-201ENSMUST00000210646 543 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Snora34-201ENSMUST00000083402 138 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm23741-201ENSMUST00000097237 171 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.32□□□□□ -2.36
Trav3-1Q5R1I8 Gm25421-201ENSMUST00000104218 164 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm25876-201ENSMUST00000104329 119 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm15120-201ENSMUST00000120602 301 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm22803-201ENSMUST00000158049 283 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm8114-201ENSMUST00000172225 484 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms