Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm25873-201ENSMUST00000180317 107 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Mir6382-201ENSMUST00000184055 110 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Mir6388-201ENSMUST00000184417 75 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Mir7009-201ENSMUST00000184519 64 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Mir6419-201ENSMUST00000184784 113 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm43510-201ENSMUST00000197922 353 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm45456-201ENSMUST00000210841 243 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Mir19a-201ENSMUST00000083482 82 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm25377-201ENSMUST00000104334 129 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm14428-201ENSMUST00000120408 822 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm15861-201ENSMUST00000120979 339 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm23083-201ENSMUST00000157851 116 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Mir3098-201ENSMUST00000175416 87 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm38149-201ENSMUST00000191943 339 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm10297-201ENSMUST00000207136 651 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm46136-201ENSMUST00000214730 565 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Snord14a-201ENSMUST00000082807 87 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Snora3-201ENSMUST00000083082 132 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.97□□□□□ -2.25
Trav5d-4Q5R1F6 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm12417-201ENSMUST00000119153 403 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm14898-201ENSMUST00000120202 645 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm13409-201ENSMUST00000122072 546 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26089-201ENSMUST00000157898 107 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm2878-201ENSMUST00000170173 486 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm24713-201ENSMUST00000178850 107 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25448-201ENSMUST00000180065 107 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Mir6962-201ENSMUST00000199512 63 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm44609-201ENSMUST00000207157 460 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm19441-201ENSMUST00000221545 330 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm381-201ENSMUST00000117443 2037 ntBASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.96□□□□□ -2.26
Trav5d-4Q5R1F6 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm12053-201ENSMUST00000119022 252 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm2768-201ENSMUST00000121062 250 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm24915-201ENSMUST00000157288 78 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm23586-201ENSMUST00000157657 123 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm24388-201ENSMUST00000177872 107 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25156-201ENSMUST00000179809 79 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm28437-201ENSMUST00000190277 783 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm9402-201ENSMUST00000196849 388 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm42925-201ENSMUST00000197359 285 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm42509-201ENSMUST00000197390 781 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm35558-202ENSMUST00000221819 499 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Gm23848-201ENSMUST00000083826 106 ntBASIC0.95□□□□□ -2.26
Trav5d-4Q5R1F6 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22780-201ENSMUST00000104084 132 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm12636-201ENSMUST00000117395 624 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm2020-201ENSMUST00000145242 579 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm8121-201ENSMUST00000153583 499 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26102-201ENSMUST00000157251 284 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm24851-201ENSMUST00000158028 103 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26029-201ENSMUST00000158659 132 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25069-201ENSMUST00000175238 86 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25874-201ENSMUST00000178030 79 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm23267-201ENSMUST00000178490 132 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm27326-201ENSMUST00000183504 95 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22620-201ENSMUST00000082700 133 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Mir221-201ENSMUST00000083488 95 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm24252-201ENSMUST00000083700 132 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms