Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm22483-201ENSMUST00000157986 274 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm4076-201ENSMUST00000179230 965 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm5329-201ENSMUST00000186898 463 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm44395-201ENSMUST00000197056 153 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm44050-201ENSMUST00000204263 527 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm45730-201ENSMUST00000212560 395 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm6109-201ENSMUST00000223297 348 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm10298-201ENSMUST00000074801 265 ntBASIC1.29□□□□□ -2.2
Col27a1Q5QNQ9 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm23744-201ENSMUST00000104231 149 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm6954-201ENSMUST00000117416 225 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm14007-201ENSMUST00000118288 210 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm23956-201ENSMUST00000157211 119 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm22076-201ENSMUST00000158601 84 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm28688-201ENSMUST00000187301 268 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm37029-201ENSMUST00000195773 239 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm44990-201ENSMUST00000203922 217 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm45232-201ENSMUST00000207811 162 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm17991-201ENSMUST00000208139 297 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm7692-201ENSMUST00000213534 409 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm23727-201ENSMUST00000083352 164 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm23040-201ENSMUST00000083869 163 ntBASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col27a1Q5QNQ9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm25506-201ENSMUST00000104339 70 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Mir5101-201ENSMUST00000175181 83 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm25451-201ENSMUST00000177832 121 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm25194-201ENSMUST00000177987 79 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Mir6335-201ENSMUST00000184081 98 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm5116-201ENSMUST00000187732 463 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm29627-201ENSMUST00000187984 463 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm43286-201ENSMUST00000197420 424 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm29817-201ENSMUST00000210098 172 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm8940-201ENSMUST00000212585 219 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.27□□□□□ -2.21
Col27a1Q5QNQ9 Gm25317-201ENSMUST00000116824 129 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm14932-201ENSMUST00000117112 453 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm6829-201ENSMUST00000119858 360 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm23008-201ENSMUST00000158946 80 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm27659-201ENSMUST00000183472 98 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm44961-201ENSMUST00000207450 196 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm45365-201ENSMUST00000209489 256 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Olfr197-201ENSMUST00000080031 926 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm22810-201ENSMUST00000082741 158 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm14774-201ENSMUST00000117857 536 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm13876-201ENSMUST00000118451 261 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm25784-201ENSMUST00000122524 81 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm25624-201ENSMUST00000157222 275 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm25454-201ENSMUST00000157947 315 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm25368-201ENSMUST00000158847 131 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm22290-201ENSMUST00000177655 107 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm22583-201ENSMUST00000178031 107 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm23619-201ENSMUST00000178411 94 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm25474-201ENSMUST00000179052 94 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm22047-201ENSMUST00000179176 94 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm29550-201ENSMUST00000185543 285 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm42647-201ENSMUST00000195939 459 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm43004-201ENSMUST00000201872 703 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm18991-201ENSMUST00000209225 746 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Gm22443-201ENSMUST00000082890 107 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.26□□□□□ -2.21
Col27a1Q5QNQ9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms