Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir6341-201ENSMUST00000183490 121 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm20885-201ENSMUST00000190192 654 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm36866-201ENSMUST00000193343 657 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm36047-201ENSMUST00000193659 657 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm20857-201ENSMUST00000194766 657 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm20858-201ENSMUST00000195459 657 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Usp28Q5I043 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm22834-201ENSMUST00000102021 79 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm12433-201ENSMUST00000119659 255 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm14551-201ENSMUST00000120802 256 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm15899-201ENSMUST00000128586 238 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm23411-201ENSMUST00000157988 62 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Usp28Q5I043 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm28825-201ENSMUST00000186233 238 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm42622-201ENSMUST00000197229 355 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Mir378a-201ENSMUST00000198300 66 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Mir691-201ENSMUST00000199719 78 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm38395-201ENSMUST00000199904 830 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm44825-201ENSMUST00000207557 150 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm44598-201ENSMUST00000207566 150 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm44754-201ENSMUST00000208155 400 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Usp28Q5I043 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.94□□□□□ -2.1
Usp28Q5I043 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Usp28Q5I043 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm13153-201ENSMUST00000120969 637 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm13409-201ENSMUST00000122072 546 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm25325-201ENSMUST00000122559 86 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm25113-201ENSMUST00000157185 143 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Mir3092-201ENSMUST00000174954 96 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm9892-201ENSMUST00000182415 992 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Mir7679-201ENSMUST00000183379 63 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.93□□□□□ -2.1
Usp28Q5I043 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm44459-201ENSMUST00000203926 160 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm9377-201ENSMUST00000207227 623 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm18696-201ENSMUST00000220103 274 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm7214-201ENSMUST00000222428 272 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Mir322-201ENSMUST00000083484 95 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.93□□□□□ -2.1
Usp28Q5I043 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm22656-201ENSMUST00000104199 171 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm16355-201ENSMUST00000128606 231 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm26278-201ENSMUST00000157098 132 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm24601-201ENSMUST00000157970 143 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm22382-201ENSMUST00000158185 130 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm22389-201ENSMUST00000158193 301 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm24885-201ENSMUST00000158783 270 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28838-201ENSMUST00000186338 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm29635-201ENSMUST00000187221 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm29026-201ENSMUST00000187787 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28797-201ENSMUST00000188543 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28855-201ENSMUST00000188680 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28705-201ENSMUST00000189548 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28939-201ENSMUST00000190351 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm28223-201ENSMUST00000190469 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm29092-201ENSMUST00000190768 315 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Trbv7-201ENSMUST00000193339 402 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Mir7021-201ENSMUST00000197026 63 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm44844-201ENSMUST00000207242 336 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.92□□□□□ -2.1
Usp28Q5I043 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm24582-201ENSMUST00000103967 103 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm22151-201ENSMUST00000116963 58 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm11386-201ENSMUST00000117761 347 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm11935-201ENSMUST00000118608 399 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm12872-201ENSMUST00000121835 320 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm14770-201ENSMUST00000122197 312 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm24191-201ENSMUST00000157977 122 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm22483-201ENSMUST00000157986 274 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm23016-201ENSMUST00000158431 62 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm24174-201ENSMUST00000158933 111 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm24862-201ENSMUST00000179103 79 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm23310-201ENSMUST00000179105 79 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm25461-201ENSMUST00000179293 79 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms