Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm8292-201ENSMUST00000162574 396 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm7925-201ENSMUST00000166690 401 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm18356-201ENSMUST00000185677 623 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm29452-201ENSMUST00000187996 313 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm45815-201ENSMUST00000220241 146 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm25135-201ENSMUST00000082648 143 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm24661-201ENSMUST00000083205 104 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm22080-201ENSMUST00000157591 106 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm24601-201ENSMUST00000157970 143 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm26215-201ENSMUST00000158584 139 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm27379-201ENSMUST00000183730 123 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm28740-201ENSMUST00000186142 215 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm37054-201ENSMUST00000193481 543 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.22□□□□□ -2.05
Trim40Q3UWA4 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Gm10025-201ENSMUST00000079568 372 ntBASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trim40Q3UWA4 Snord98-201ENSMUST00000116819 65 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Gm14881-201ENSMUST00000120366 372 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Gm27753-201ENSMUST00000184742 203 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Gm37557-201ENSMUST00000191640 139 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.21□□□□□ -2.06
Trim40Q3UWA4 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm13457-201ENSMUST00000117885 267 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm12934-201ENSMUST00000119221 343 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm14269-201ENSMUST00000120455 306 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm22718-201ENSMUST00000122701 315 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm23557-201ENSMUST00000157820 138 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm24771-201ENSMUST00000158508 137 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm4468-201ENSMUST00000170206 294 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm37128-201ENSMUST00000192599 232 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm18971-201ENSMUST00000197240 374 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm43510-201ENSMUST00000197922 353 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm43884-201ENSMUST00000204251 559 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm18453-201ENSMUST00000208000 626 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm25801-201ENSMUST00000082638 106 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Trim40Q3UWA4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm6574-201ENSMUST00000120037 362 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm22791-201ENSMUST00000157232 145 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm23829-201ENSMUST00000157392 270 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm23668-201ENSMUST00000157465 111 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm25909-201ENSMUST00000157619 121 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm24853-201ENSMUST00000158026 121 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm24846-201ENSMUST00000158033 108 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm23660-201ENSMUST00000178362 79 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm24088-201ENSMUST00000179100 79 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm10105-201ENSMUST00000184601 270 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm29335-201ENSMUST00000188361 459 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm43472-201ENSMUST00000200175 154 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm43264-201ENSMUST00000202284 325 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm8940-201ENSMUST00000212585 219 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm22364-201ENSMUST00000083097 98 ntBASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trim40Q3UWA4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm24582-201ENSMUST00000103967 103 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm16355-201ENSMUST00000128606 231 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm25910-201ENSMUST00000157620 140 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm22382-201ENSMUST00000158185 130 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm25434-201ENSMUST00000158278 167 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Mir3965-201ENSMUST00000175570 69 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm20885-201ENSMUST00000190192 654 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm44966-201ENSMUST00000208096 157 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Gm22365-201ENSMUST00000093750 117 ntBASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms