Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm23100-201ENSMUST00000083455 141 ntBASIC1.54□□□□□ -2.16
Trim43aQ3TL54 Gm22578-201ENSMUST00000083730 107 ntBASIC1.54□□□□□ -2.16
Trim43aQ3TL54 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trim43aQ3TL54 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trim43aQ3TL54 Gm13378-201ENSMUST00000117483 336 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm14713-201ENSMUST00000122362 686 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm23752-201ENSMUST00000157584 115 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm23381-201ENSMUST00000157676 94 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm23267-201ENSMUST00000178490 132 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm27028-201ENSMUST00000182303 399 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm29603-201ENSMUST00000186792 334 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Mir3068-202ENSMUST00000197755 79 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim43aQ3TL54 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.53□□□□□ -2.16
Trim43aQ3TL54 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm26080-201ENSMUST00000104069 131 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm23202-201ENSMUST00000104376 129 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm14835-201ENSMUST00000119039 315 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm12512-201ENSMUST00000119620 217 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm27396-201ENSMUST00000157708 58 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm10297-201ENSMUST00000207136 651 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm22508-201ENSMUST00000082772 110 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm25853-201ENSMUST00000082793 132 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.52□□□□□ -2.17
Trim43aQ3TL54 Gm22597-201ENSMUST00000157602 80 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm23558-201ENSMUST00000157823 80 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm24439-201ENSMUST00000157894 117 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Zfp950-206ENSMUST00000178819 171 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm24306-201ENSMUST00000180229 79 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm42925-201ENSMUST00000197359 285 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Gm7692-201ENSMUST00000213534 409 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Mir320-201ENSMUST00000083594 82 ntBASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Trim43aQ3TL54 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Mir653-201ENSMUST00000102402 85 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm14013-201ENSMUST00000119006 270 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm14215-201ENSMUST00000120578 221 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm12372-201ENSMUST00000121654 768 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm25784-201ENSMUST00000122524 81 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm25325-201ENSMUST00000122559 86 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm25888-201ENSMUST00000157778 302 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm24997-201ENSMUST00000157910 105 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm24551-201ENSMUST00000158645 92 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm23196-201ENSMUST00000158806 107 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm22862-201ENSMUST00000178593 121 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm25730-201ENSMUST00000178753 165 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm27878-201ENSMUST00000184000 106 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm10193-201ENSMUST00000188288 231 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trim43aQ3TL54 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm19032-201ENSMUST00000208584 592 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trim43aQ3TL54 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Gm24921-201ENSMUST00000083024 107 ntBASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim43aQ3TL54 Mir687-201ENSMUST00000102166 89 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm12351-201ENSMUST00000118727 292 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm14765-201ENSMUST00000121954 326 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm24902-201ENSMUST00000158126 123 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm26004-201ENSMUST00000158804 116 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm15914-201ENSMUST00000161922 309 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Snord87-201ENSMUST00000175437 87 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm22633-201ENSMUST00000179834 107 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm28794-201ENSMUST00000185276 136 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm28151-201ENSMUST00000189404 951 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm28404-201ENSMUST00000190242 453 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 Gm37438-201ENSMUST00000192813 393 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.49□□□□□ -2.17
Trim43aQ3TL54 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 169.8 ms