Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm27285-201ENSMUST00000183875 127 ntBASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm27743-201ENSMUST00000185136 126 ntBASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm43749-201ENSMUST00000199345 352 ntBASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm6796-201ENSMUST00000211919 243 ntBASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm25630-201ENSMUST00000084000 162 ntBASIC3.62□□□□□ -1.83
Ebf1Q07802 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Ebf1Q07802 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ebf1Q07802 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Ebf1Q07802 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ebf1Q07802 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ebf1Q07802 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ebf1Q07802 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ebf1Q07802 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm23472-201ENSMUST00000101806 191 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm22779-201ENSMUST00000104085 107 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm25376-201ENSMUST00000104340 133 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm11598-201ENSMUST00000119257 357 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm14593-201ENSMUST00000119948 294 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm12412-201ENSMUST00000121867 328 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm23466-201ENSMUST00000157133 106 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Mir1967-201ENSMUST00000157789 82 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm24497-201ENSMUST00000177868 191 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm37698-201ENSMUST00000192605 463 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm37431-201ENSMUST00000195102 111 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm44337-201ENSMUST00000196553 114 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm18341-201ENSMUST00000197538 622 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm44600-201ENSMUST00000208540 111 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm40810-201ENSMUST00000219149 253 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm23444-201ENSMUST00000082922 191 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ebf1Q07802 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.61□□□□□ -1.83
Ebf1Q07802 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ebf1Q07802 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ebf1Q07802 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm23530-201ENSMUST00000104564 137 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Mir872-201ENSMUST00000104728 81 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm14629-201ENSMUST00000122428 144 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm25599-201ENSMUST00000157816 103 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm26171-201ENSMUST00000158422 131 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm21827-201ENSMUST00000178247 423 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm27535-201ENSMUST00000183814 157 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm36189-201ENSMUST00000204113 523 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm45907-201ENSMUST00000213023 193 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.6□□□□□ -1.83
Ebf1Q07802 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Gm22828-201ENSMUST00000083768 107 ntBASIC3.6□□□□□ -1.83
Ebf1Q07802 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ebf1Q07802 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm23063-201ENSMUST00000102350 93 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm13432-201ENSMUST00000118861 241 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm14922-201ENSMUST00000121131 163 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm24627-201ENSMUST00000122764 138 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm22767-201ENSMUST00000158365 165 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm27445-201ENSMUST00000184484 72 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm37923-201ENSMUST00000191624 161 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm44084-201ENSMUST00000203947 409 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm44922-201ENSMUST00000206690 90 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm18213-201ENSMUST00000207850 178 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ebf1Q07802 Snora70-201ENSMUST00000083047 137 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Gm24533-201ENSMUST00000083138 196 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 Mir302d-201ENSMUST00000083513 66 ntBASIC3.59□□□□□ -1.83
Ebf1Q07802 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.59□□□□□ -1.84
Ebf1Q07802 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ebf1Q07802 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ebf1Q07802 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ebf1Q07802 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ebf1Q07802 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms