Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Gm31849-201ENSMUST00000220306 375 ntBASIC1.01□□□□□ -2.25
Cux1P53564 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.01□□□□□ -2.25
Cux1P53564 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Gm22247-201ENSMUST00000082476 131 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Cux1P53564 Gm11857-201ENSMUST00000119817 324 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm26349-201ENSMUST00000157530 130 ntBASIC1□□□□□ -2.25
Cux1P53564 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Cux1P53564 Gm26285-201ENSMUST00000177923 107 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm21171-201ENSMUST00000180048 673 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm37002-201ENSMUST00000194560 373 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm18635-201ENSMUST00000199020 1060 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm44050-201ENSMUST00000204263 527 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm23622-201ENSMUST00000082460 107 ntBASIC1□□□□□ -2.25
Cux1P53564 Gm6587-201ENSMUST00000120219 613 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm22482-201ENSMUST00000122563 359 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm23752-201ENSMUST00000157584 115 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm24333-201ENSMUST00000175101 84 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Mir6341-201ENSMUST00000183490 121 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.99□□□□□ -2.25
Cux1P53564 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.99□□□□□ -2.25
Cux1P53564 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.99□□□□□ -2.25
Cux1P53564 Gm23517-201ENSMUST00000082830 192 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm14355-201ENSMUST00000117352 264 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm14669-201ENSMUST00000118841 250 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Snrpert-201ENSMUST00000121967 279 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm21754-201ENSMUST00000177550 479 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Cux1P53564 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Cux1P53564 Gm10298-201ENSMUST00000074801 265 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm26327-201ENSMUST00000093724 111 ntBASIC0.99□□□□□ -2.25
Cux1P53564 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Cux1P53564 Gm14657-201ENSMUST00000117461 302 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm11845-201ENSMUST00000117886 327 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm15211-201ENSMUST00000118932 528 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm13482-201ENSMUST00000119842 254 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm14915-201ENSMUST00000120747 204 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Cux1P53564 Gm23381-201ENSMUST00000157676 94 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm18397-201ENSMUST00000176704 587 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm19891-201ENSMUST00000189771 303 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm29950-201ENSMUST00000195273 237 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm44564-201ENSMUST00000207985 180 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Gm7692-201ENSMUST00000213534 409 ntBASIC0.98□□□□□ -2.25
Cux1P53564 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.98□□□□□ -2.25
Cux1P53564 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.98□□□□□ -2.25
Cux1P53564 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.98□□□□□ -2.25
Cux1P53564 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Cux1P53564 Gm11065-201ENSMUST00000111462 228 ntBASIC0.97□□□□□ -2.25
Cux1P53564 Gm12639-201ENSMUST00000121400 493 ntBASIC0.97□□□□□ -2.25
Cux1P53564 Gm26435-201ENSMUST00000179026 107 ntBASIC0.97□□□□□ -2.25
Cux1P53564 Mir7091-201ENSMUST00000184075 79 ntBASIC0.97□□□□□ -2.25
Cux1P53564 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Cux1P53564 Gm23370-202ENSMUST00000197008 129 ntBASIC0.97□□□□□ -2.25
Cux1P53564 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.97□□□□□ -2.25
Cux1P53564 Gm22265-201ENSMUST00000082947 116 ntBASIC0.97□□□□□ -2.25
Cux1P53564 Gm7429-201ENSMUST00000118664 348 ntBASIC0.96□□□□□ -2.26
Cux1P53564 Gm9001-201ENSMUST00000121642 399 ntBASIC0.96□□□□□ -2.26
Cux1P53564 Gm22944-201ENSMUST00000158662 133 ntBASIC0.96□□□□□ -2.26
Cux1P53564 Gm26189-201ENSMUST00000179879 107 ntBASIC0.96□□□□□ -2.26
Cux1P53564 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Cux1P53564 Gm37029-201ENSMUST00000195773 239 ntBASIC0.96□□□□□ -2.26
Cux1P53564 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.96□□□□□ -2.26
Cux1P53564 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
Cux1P53564 Gm23907-201ENSMUST00000104595 189 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm22537-201ENSMUST00000158172 199 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm22425-201ENSMUST00000158532 138 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm25243-201ENSMUST00000174912 207 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm24100-201ENSMUST00000178592 79 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm29397-201ENSMUST00000185205 333 ntBASIC0.95□□□□□ -2.26
Cux1P53564 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.95□□□□□ -2.26
Cux1P53564 Gm18039-201ENSMUST00000217816 728 ntBASIC0.95□□□□□ -2.26
Cux1P53564 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.95□□□□□ -2.26
Cux1P53564 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Cux1P53564 Gm14785-201ENSMUST00000120185 539 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm11575-201ENSMUST00000122243 228 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm25333-201ENSMUST00000158035 246 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Cux1P53564 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.94□□□□□ -2.26
Cux1P53564 Mir7683-201ENSMUST00000183842 61 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm37743-201ENSMUST00000194645 376 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm44825-201ENSMUST00000207557 150 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm44598-201ENSMUST00000207566 150 ntBASIC0.94□□□□□ -2.26
Cux1P53564 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.94□□□□□ -2.26
Cux1P53564 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.94□□□□□ -2.26
Cux1P53564 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm12656-201ENSMUST00000118149 577 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.94□□□□□ -2.26
Cux1P53564 Gm24915-201ENSMUST00000157288 78 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm24264-201ENSMUST00000179835 94 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Gm37568-201ENSMUST00000191755 364 ntBASIC0.94□□□□□ -2.26
Cux1P53564 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms