Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm24817-201ENSMUST00000093672 105 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Rfx1P48377 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Rfx1P48377 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rfx1P48377 Gm26027-201ENSMUST00000122725 268 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm24892-201ENSMUST00000122747 104 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC4.18□□□□□ -1.74
Rfx1P48377 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.18□□□□□ -1.74
Rfx1P48377 Gm24908-201ENSMUST00000157294 127 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm22192-201ENSMUST00000175128 85 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Mir5710-201ENSMUST00000176884 69 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Mir7047-201ENSMUST00000184595 64 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm28627-201ENSMUST00000186141 453 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm18015-201ENSMUST00000214879 316 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm24966-201ENSMUST00000082443 79 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm22304-201ENSMUST00000082688 129 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm25632-201ENSMUST00000083112 85 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Mir29b-2-201ENSMUST00000083478 81 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Rfx1P48377 Gm43268-201ENSMUST00000201536 4055 ntBASIC4.18□□□□□ -1.74
Rfx1P48377 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Rfx1P48377 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rfx1P48377 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rfx1P48377 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rfx1P48377 Gm16005-201ENSMUST00000120515 269 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Gm23933-201ENSMUST00000178405 79 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Gm42774-201ENSMUST00000198854 283 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Gm25930-201ENSMUST00000082785 107 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Gm23039-201ENSMUST00000083870 161 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Mir471-201ENSMUST00000093596 67 ntBASIC4.17□□□□□ -1.74
Rfx1P48377 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Rfx1P48377 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rfx1P48377 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rfx1P48377 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Rfx1P48377 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Rfx1P48377 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rfx1P48377 Gm25420-201ENSMUST00000104216 127 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm26145-201ENSMUST00000104476 127 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rfx1P48377 AC154297.1-201ENSMUST00000171334 397 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.16□□□□□ -1.74
Rfx1P48377 Mir6402-201ENSMUST00000183406 80 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm27761-201ENSMUST00000184091 131 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm42739-201ENSMUST00000200687 226 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm22978-201ENSMUST00000082607 160 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm25205-201ENSMUST00000082841 103 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Gm24204-201ENSMUST00000082950 107 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Snora70-201ENSMUST00000083047 137 ntBASIC4.16□□□□□ -1.74
Rfx1P48377 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rfx1P48377 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Rfx1P48377 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.15□□□□□ -1.74
Rfx1P48377 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Rfx1P48377 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.15□□□□□ -1.74
Rfx1P48377 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Rfx1P48377 Gm11356-201ENSMUST00000118974 192 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.15□□□□□ -1.75
Rfx1P48377 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.15□□□□□ -1.75
Rfx1P48377 Gm22034-201ENSMUST00000157283 134 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.15□□□□□ -1.75
Rfx1P48377 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Gm44294-201ENSMUST00000205090 728 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Gm45002-201ENSMUST00000208045 120 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Gm30674-201ENSMUST00000214523 392 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Snord15a-201ENSMUST00000083888 148 ntBASIC4.15□□□□□ -1.75
Rfx1P48377 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Rfx1P48377 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Rfx1P48377 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Rfx1P48377 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Rfx1P48377 Gm23472-201ENSMUST00000101806 191 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm14448-201ENSMUST00000116383 210 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm11204-201ENSMUST00000122438 147 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.14□□□□□ -1.75
Rfx1P48377 Gm26279-201ENSMUST00000157095 102 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm25015-201ENSMUST00000158400 128 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm24497-201ENSMUST00000177868 191 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm27189-201ENSMUST00000184119 190 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Mir6914-201ENSMUST00000184999 69 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Rfx1P48377 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm23444-201ENSMUST00000082922 191 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Gm26165-201ENSMUST00000083791 138 ntBASIC4.14□□□□□ -1.75
Rfx1P48377 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Rfx1P48377 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rfx1P48377 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.13□□□□□ -1.75
Rfx1P48377 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Rfx1P48377 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Rfx1P48377 Snord14c-201ENSMUST00000101927 86 ntBASIC4.13□□□□□ -1.75
Rfx1P48377 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Rfx1P48377 Gm22269-201ENSMUST00000104002 130 ntBASIC4.13□□□□□ -1.75
Rfx1P48377 Snord19-201ENSMUST00000104609 76 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms