Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.04□□□□□ -2.4
HttP42859 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC0.04□□□□□ -2.4
HttP42859 Mir300-201ENSMUST00000083485 79 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm26157-201ENSMUST00000158974 126 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.04□□□□□ -2.4
HttP42859 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm24203-201ENSMUST00000082949 114 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm26147-201ENSMUST00000104479 114 ntBASIC0.03□□□□□ -2.4
HttP42859 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.03□□□□□ -2.4
HttP42859 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.03□□□□□ -2.4
HttP42859 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC0.03□□□□□ -2.4
HttP42859 Mir3108-201ENSMUST00000175500 79 ntBASIC0.03□□□□□ -2.4
HttP42859 Mir145b-201ENSMUST00000184434 75 ntBASIC0.03□□□□□ -2.4
HttP42859 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.03□□□□□ -2.4
HttP42859 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.03□□□□□ -2.4
HttP42859 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm29575-201ENSMUST00000190597 315 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm44455-201ENSMUST00000200061 82 ntBASIC0.02□□□□□ -2.41
HttP42859 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm26018-201ENSMUST00000104406 128 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm24911-201ENSMUST00000157292 136 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm24725-201ENSMUST00000158229 125 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HttP42859 Mir6342-201ENSMUST00000183870 125 ntBASIC0.02□□□□□ -2.41
HttP42859 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.02□□□□□ -2.41
HttP42859 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HttP42859 Gm25518-201ENSMUST00000083864 107 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm15037-201ENSMUST00000120358 259 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm13440-201ENSMUST00000121665 496 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm22706-201ENSMUST00000157907 112 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm24837-201ENSMUST00000158683 81 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.02□□□□□ -2.41
HttP42859 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
HttP42859 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm29299-201ENSMUST00000185609 923 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm18357-201ENSMUST00000188184 580 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm29490-201ENSMUST00000190923 342 ntBASIC0.02□□□□□ -2.41
HttP42859 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HttP42859 Gm36997-201ENSMUST00000195090 707 ntBASIC0.02□□□□□ -2.41
HttP42859 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
HttP42859 Gm25338-201ENSMUST00000116849 120 ntBASIC0.01□□□□□ -2.41
HttP42859 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm22382-201ENSMUST00000158185 130 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm22522-201ENSMUST00000158271 151 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.01□□□□□ -2.41
HttP42859 Gm4921-201ENSMUST00000219804 992 ntBASIC0.01□□□□□ -2.41
HttP42859 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.01□□□□□ -2.41
HttP42859 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm25557-201ENSMUST00000158084 315 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm24561-201ENSMUST00000175182 95 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm44654-201ENSMUST00000208052 329 ntBASIC0.01□□□□□ -2.41
HttP42859 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.01□□□□□ -2.41
HttP42859 Gm23314-201ENSMUST00000157218 107 ntBASIC0□□□□□ -2.41
HttP42859 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0□□□□□ -2.41
HttP42859 Mir6393-201ENSMUST00000183709 94 ntBASIC0□□□□□ -2.41
HttP42859 Gm28356-202ENSMUST00000187566 858 ntBASIC0□□□□□ -2.41
HttP42859 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0□□□□□ -2.41
HttP42859 Gm24622-201ENSMUST00000082619 162 ntBASIC0□□□□□ -2.41
HttP42859 Gm26326-201ENSMUST00000083070 129 ntBASIC0□□□□□ -2.41
HttP42859 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0□□□□□ -2.41
HttP42859 Mir672-201ENSMUST00000102331 100 ntBASIC0□□□□□ -2.41
HttP42859 Gm25905-201ENSMUST00000158490 101 ntBASIC0□□□□□ -2.41
HttP42859 Gm20794-201ENSMUST00000177626 628 ntBASIC0□□□□□ -2.41
HttP42859 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0□□□□□ -2.41
HttP42859 Mir7043-201ENSMUST00000184219 70 ntBASIC0□□□□□ -2.41
HttP42859 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
HttP42859 Gm20885-201ENSMUST00000190192 654 ntBASIC0□□□□□ -2.41
HttP42859 Gm28921-201ENSMUST00000190219 378 ntBASIC0□□□□□ -2.41
HttP42859 Gm33571-201ENSMUST00000193271 657 ntBASIC0□□□□□ -2.41
HttP42859 Gm36866-201ENSMUST00000193343 657 ntBASIC0□□□□□ -2.41
HttP42859 Gm36047-201ENSMUST00000193659 657 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms