Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm22631-201ENSMUST00000179656 94 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm24518-201ENSMUST00000180275 94 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm27443-201ENSMUST00000184660 98 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm27919-201ENSMUST00000185163 107 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm28058-201ENSMUST00000186421 264 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm28404-201ENSMUST00000190242 453 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Mir3068-202ENSMUST00000197755 79 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.76□□□□□ -2.13
Sox6P40645 Gm44181-201ENSMUST00000203106 483 ntBASIC1.76□□□□□ -2.13
Sox6P40645 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Gm44533-201ENSMUST00000207782 268 ntBASIC1.76□□□□□ -2.13
Sox6P40645 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.76□□□□□ -2.13
Sox6P40645 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.76□□□□□ -2.13
Sox6P40645 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.76□□□□□ -2.13
Sox6P40645 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.76□□□□□ -2.13
Sox6P40645 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
Sox6P40645 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Sox6P40645 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Sox6P40645 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sox6P40645 Gm23202-201ENSMUST00000104376 129 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm25325-201ENSMUST00000122559 86 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm16328-201ENSMUST00000126985 196 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm22664-201ENSMUST00000158719 105 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm23196-201ENSMUST00000158806 107 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm23548-201ENSMUST00000158963 106 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm37550-201ENSMUST00000193230 463 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.75□□□□□ -2.13
Sox6P40645 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sox6P40645 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.75□□□□□ -2.13
Sox6P40645 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.75□□□□□ -2.13
Sox6P40645 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Sox6P40645 Gm25853-201ENSMUST00000082793 132 ntBASIC1.75□□□□□ -2.13
Sox6P40645 Mir322-201ENSMUST00000083484 95 ntBASIC1.75□□□□□ -2.13
Sox6P40645 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sox6P40645 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Sox6P40645 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Sox6P40645 Mdga2-203ENSMUST00000113942 423 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm12370-201ENSMUST00000117809 604 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm14301-201ENSMUST00000120181 324 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm14709-201ENSMUST00000121225 304 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm14638-201ENSMUST00000121338 216 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.74□□□□□ -2.13
Sox6P40645 Gm22192-201ENSMUST00000175128 85 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm24418-201ENSMUST00000177597 79 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm24639-201ENSMUST00000178518 79 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm23076-201ENSMUST00000179082 79 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm25077-201ENSMUST00000179157 79 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm27544-201ENSMUST00000185069 155 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm28343-201ENSMUST00000185386 112 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Snord43-201ENSMUST00000199549 108 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm44011-201ENSMUST00000203336 394 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm18453-201ENSMUST00000208000 626 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.74□□□□□ -2.13
Sox6P40645 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.74□□□□□ -2.13
Sox6P40645 Gm35558-203ENSMUST00000222264 204 ntBASIC1.74□□□□□ -2.13
Sox6P40645 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm25475-201ENSMUST00000082825 180 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm25632-201ENSMUST00000083112 85 ntBASIC1.74□□□□□ -2.13
Sox6P40645 Gm26108-201ENSMUST00000083973 191 ntBASIC1.74□□□□□ -2.13
Sox6P40645 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm7916-201ENSMUST00000120325 456 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm14551-201ENSMUST00000120802 256 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm14362-201ENSMUST00000121679 273 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm15254-201ENSMUST00000149567 273 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm22843-201ENSMUST00000157710 134 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm24837-201ENSMUST00000158683 81 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm22668-201ENSMUST00000158716 260 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm19932-201ENSMUST00000177033 313 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm24656-201ENSMUST00000177548 132 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm25020-201ENSMUST00000178071 107 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm23862-201ENSMUST00000180342 94 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm27979-201ENSMUST00000185126 56 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Gm28151-201ENSMUST00000189404 951 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Sox6P40645 Gm37778-201ENSMUST00000191732 190 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sox6P40645 Gm43529-201ENSMUST00000199178 412 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sox6P40645 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.73□□□□□ -2.13
Sox6P40645 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.73□□□□□ -2.13
Sox6P40645 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.73□□□□□ -2.13
Sox6P40645 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sox6P40645 Gm24165-201ENSMUST00000082718 128 ntBASIC1.73□□□□□ -2.13
Sox6P40645 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sox6P40645 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sox6P40645 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sox6P40645 Gm25485-201ENSMUST00000104120 132 ntBASIC1.72□□□□□ -2.13
Sox6P40645 Gm13378-201ENSMUST00000117483 336 ntBASIC1.72□□□□□ -2.13
Sox6P40645 Gm23184-201ENSMUST00000122594 131 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms