Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.54□□□□□ -2
Traf1P39428 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
Traf1P39428 Gm22806-201ENSMUST00000082738 136 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm22353-201ENSMUST00000083918 136 ntBASIC2.54□□□□□ -2
Traf1P39428 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Traf1P39428 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.53□□□□□ -2
Traf1P39428 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.53□□□□□ -2
Traf1P39428 Mir743b-201ENSMUST00000104751 77 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Traf1P39428 Gm13433-201ENSMUST00000121701 240 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm12770-201ENSMUST00000121734 462 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm23324-201ENSMUST00000157421 131 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm23641-201ENSMUST00000157857 101 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm22192-201ENSMUST00000175128 85 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm27991-201ENSMUST00000184804 137 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm27624-201ENSMUST00000185047 177 ntBASIC2.53□□□□□ -2
Traf1P39428 Mir6376-201ENSMUST00000185149 131 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm37377-201ENSMUST00000191733 304 ntBASIC2.53□□□□□ -2
Traf1P39428 Mir497-201ENSMUST00000200557 84 ntBASIC2.53□□□□□ -2
Traf1P39428 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm18991-201ENSMUST00000209225 746 ntBASIC2.53□□□□□ -2
Traf1P39428 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.53□□□□□ -2
Traf1P39428 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.53□□□□□ -2
Traf1P39428 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.53□□□□□ -2
Traf1P39428 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.53□□□□□ -2
Traf1P39428 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.53□□□□□ -2
Traf1P39428 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.53□□□□□ -2
Traf1P39428 Gm25632-201ENSMUST00000083112 85 ntBASIC2.53□□□□□ -2
Traf1P39428 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Traf1P39428 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24098-201ENSMUST00000102075 109 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25381-201ENSMUST00000102078 109 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm14894-201ENSMUST00000117170 270 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24596-201ENSMUST00000122504 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm14364-201ENSMUST00000129209 267 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.52□□□□□ -2.01
Traf1P39428 Gm23469-201ENSMUST00000157131 104 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22083-201ENSMUST00000157586 102 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24584-201ENSMUST00000157972 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25211-201ENSMUST00000177553 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24540-201ENSMUST00000177627 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25256-201ENSMUST00000177746 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22822-201ENSMUST00000177941 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Rnu6-201ENSMUST00000178023 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23151-201ENSMUST00000178061 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25245-201ENSMUST00000178139 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24753-201ENSMUST00000178183 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25829-201ENSMUST00000178275 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22092-201ENSMUST00000178290 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24486-201ENSMUST00000178420 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23217-201ENSMUST00000178482 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26245-201ENSMUST00000178491 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23610-201ENSMUST00000178659 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23092-201ENSMUST00000178688 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25709-201ENSMUST00000178844 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25547-201ENSMUST00000178877 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25312-201ENSMUST00000178972 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24722-201ENSMUST00000179017 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22969-201ENSMUST00000179018 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25101-201ENSMUST00000179057 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26378-201ENSMUST00000179093 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24873-201ENSMUST00000179101 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23934-201ENSMUST00000179111 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22623-201ENSMUST00000179244 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25737-201ENSMUST00000179274 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22618-201ENSMUST00000179376 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24182-201ENSMUST00000179419 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24242-201ENSMUST00000179440 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24863-201ENSMUST00000179499 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25064-201ENSMUST00000179535 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26295-201ENSMUST00000179690 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23712-201ENSMUST00000179713 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22823-201ENSMUST00000179754 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22360-201ENSMUST00000179775 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24978-201ENSMUST00000179782 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24967-201ENSMUST00000179791 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25173-201ENSMUST00000179794 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24870-201ENSMUST00000179897 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22288-201ENSMUST00000179904 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22645-201ENSMUST00000180010 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24565-201ENSMUST00000180099 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23805-201ENSMUST00000180129 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23512-201ENSMUST00000180237 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25327-201ENSMUST00000180263 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26058-201ENSMUST00000180294 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22418-201ENSMUST00000180326 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.52□□□□□ -2.01
Traf1P39428 Gm37449-201ENSMUST00000193016 270 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm18658-201ENSMUST00000195558 270 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm5001-201ENSMUST00000204361 331 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm44446-201ENSMUST00000204864 255 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23629-201ENSMUST00000082465 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23924-201ENSMUST00000082474 108 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22246-201ENSMUST00000082478 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22749-201ENSMUST00000082490 107 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms