Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
P20040 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
P20040 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.75□□□□□ -2.13
P20040 Gm24984-201ENSMUST00000104454 133 ntBASIC1.75□□□□□ -2.13
P20040 Gm22678-201ENSMUST00000116974 101 ntBASIC1.75□□□□□ -2.13
P20040 Gm15215-201ENSMUST00000117773 489 ntBASIC1.75□□□□□ -2.13
P20040 Gm14766-201ENSMUST00000121689 367 ntBASIC1.75□□□□□ -2.13
P20040 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
P20040 Gm24901-201ENSMUST00000158125 110 ntBASIC1.75□□□□□ -2.13
P20040 Gm25012-201ENSMUST00000158396 164 ntBASIC1.75□□□□□ -2.13
P20040 Gm25163-201ENSMUST00000158905 104 ntBASIC1.75□□□□□ -2.13
P20040 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.75□□□□□ -2.13
P20040 Gm8151-201ENSMUST00000184817 871 ntBASIC1.75□□□□□ -2.13
P20040 Gm27588-201ENSMUST00000185096 263 ntBASIC1.75□□□□□ -2.13
P20040 Gm18185-201ENSMUST00000186725 667 ntBASIC1.75□□□□□ -2.13
P20040 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
P20040 Gm42807-201ENSMUST00000200141 329 ntBASIC1.75□□□□□ -2.13
P20040 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.75□□□□□ -2.13
P20040 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.75□□□□□ -2.13
P20040 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.75□□□□□ -2.13
P20040 Gm25859-201ENSMUST00000083710 91 ntBASIC1.75□□□□□ -2.13
P20040 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.74□□□□□ -2.13
P20040 Gm14402-201ENSMUST00000122217 508 ntBASIC1.74□□□□□ -2.13
P20040 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
P20040 Gm25113-201ENSMUST00000157185 143 ntBASIC1.74□□□□□ -2.13
P20040 Gm25888-201ENSMUST00000157778 302 ntBASIC1.74□□□□□ -2.13
P20040 Gm24837-201ENSMUST00000158683 81 ntBASIC1.74□□□□□ -2.13
P20040 Gm23548-201ENSMUST00000158963 106 ntBASIC1.74□□□□□ -2.13
P20040 Gm24388-201ENSMUST00000177872 107 ntBASIC1.74□□□□□ -2.13
P20040 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.74□□□□□ -2.13
P20040 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.74□□□□□ -2.13
P20040 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.74□□□□□ -2.13
P20040 Mir691-201ENSMUST00000199719 78 ntBASIC1.74□□□□□ -2.13
P20040 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
P20040 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.74□□□□□ -2.13
P20040 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.74□□□□□ -2.13
P20040 Gm25475-201ENSMUST00000082825 180 ntBASIC1.74□□□□□ -2.13
P20040 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.74□□□□□ -2.13
P20040 Mir322-201ENSMUST00000083484 95 ntBASIC1.74□□□□□ -2.13
P20040 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.74□□□□□ -2.13
P20040 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.74□□□□□ -2.13
P20040 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
P20040 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.73□□□□□ -2.13
P20040 Gm23331-201ENSMUST00000157423 108 ntBASIC1.73□□□□□ -2.13
P20040 Gm26157-201ENSMUST00000158974 126 ntBASIC1.73□□□□□ -2.13
P20040 Gm37658-201ENSMUST00000192672 315 ntBASIC1.73□□□□□ -2.13
P20040 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
P20040 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.73□□□□□ -2.13
P20040 Gm17990-201ENSMUST00000211728 553 ntBASIC1.73□□□□□ -2.13
P20040 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.73□□□□□ -2.13
P20040 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.73□□□□□ -2.13
P20040 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.73□□□□□ -2.13
P20040 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.73□□□□□ -2.13
P20040 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.73□□□□□ -2.13
P20040 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.73□□□□□ -2.13
P20040 Gm22062-201ENSMUST00000082563 107 ntBASIC1.73□□□□□ -2.13
P20040 Gm25853-201ENSMUST00000082793 132 ntBASIC1.73□□□□□ -2.13
P20040 Gm22577-201ENSMUST00000083731 109 ntBASIC1.73□□□□□ -2.13
P20040 Gm26108-201ENSMUST00000083973 191 ntBASIC1.73□□□□□ -2.13
P20040 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.73□□□□□ -2.13
P20040 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
P20040 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
P20040 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.72□□□□□ -2.13
P20040 Gm14823-201ENSMUST00000117698 238 ntBASIC1.72□□□□□ -2.13
P20040 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.72□□□□□ -2.13
P20040 Gm15692-201ENSMUST00000152173 352 ntBASIC1.72□□□□□ -2.13
P20040 Gm25392-201ENSMUST00000157335 297 ntBASIC1.72□□□□□ -2.13
P20040 Gm26345-201ENSMUST00000157534 120 ntBASIC1.72□□□□□ -2.13
P20040 Gm27878-201ENSMUST00000184000 106 ntBASIC1.72□□□□□ -2.13
P20040 Mir7j-201ENSMUST00000184427 122 ntBASIC1.72□□□□□ -2.13
P20040 Mir7226-201ENSMUST00000184953 60 ntBASIC1.72□□□□□ -2.13
P20040 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.72□□□□□ -2.13
P20040 Gm28058-201ENSMUST00000186421 264 ntBASIC1.72□□□□□ -2.13
P20040 Gm43582-201ENSMUST00000196149 343 ntBASIC1.72□□□□□ -2.13
P20040 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.72□□□□□ -2.13
P20040 Gm18453-201ENSMUST00000208000 626 ntBASIC1.72□□□□□ -2.13
P20040 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.72□□□□□ -2.13
P20040 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.72□□□□□ -2.13
P20040 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.72□□□□□ -2.13
P20040 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.72□□□□□ -2.13
P20040 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.72□□□□□ -2.13
P20040 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.72□□□□□ -2.13
P20040 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.72□□□□□ -2.13
P20040 Gm24035-201ENSMUST00000082867 107 ntBASIC1.72□□□□□ -2.13
P20040 Mir29c-201ENSMUST00000083614 88 ntBASIC1.72□□□□□ -2.13
P20040 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.72□□□□□ -2.13
P20040 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
P20040 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.71□□□□□ -2.14
P20040 Gm25090-201ENSMUST00000104000 132 ntBASIC1.71□□□□□ -2.14
P20040 Gm12235-201ENSMUST00000118596 170 ntBASIC1.71□□□□□ -2.14
P20040 Gm25052-201ENSMUST00000122661 158 ntBASIC1.71□□□□□ -2.14
P20040 Gm15281-201ENSMUST00000125181 351 ntBASIC1.71□□□□□ -2.14
P20040 Trav20-201ENSMUST00000142754 347 ntBASIC1.71□□□□□ -2.14
P20040 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.71□□□□□ -2.14
P20040 Gm24481-201ENSMUST00000157210 102 ntBASIC1.71□□□□□ -2.14
P20040 Gm22727-201ENSMUST00000158090 116 ntBASIC1.71□□□□□ -2.14
P20040 Gm17161-201ENSMUST00000169187 524 ntBASIC1.71□□□□□ -2.14
P20040 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.71□□□□□ -2.14
P20040 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.71□□□□□ -2.14
P20040 Gm24573-201ENSMUST00000175499 112 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms