Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm22708-201ENSMUST00000158987 103 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Mir3058-201ENSMUST00000175126 91 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm29452-201ENSMUST00000187996 313 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm28159-201ENSMUST00000190296 696 ntBASIC4.13□□□□□ -1.75
Msx1P13297 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Msx1P13297 Gm37918-201ENSMUST00000192071 120 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm43264-201ENSMUST00000202284 325 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm23445-201ENSMUST00000082800 107 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm22443-201ENSMUST00000082890 107 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm22055-201ENSMUST00000083388 107 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Msx1P13297 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Msx1P13297 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Msx1P13297 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Msx1P13297 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.13□□□□□ -1.75
Msx1P13297 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Msx1P13297 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Msx1P13297 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Msx1P13297 Gm43877-201ENSMUST00000205029 2238 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm26051-201ENSMUST00000104642 93 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm13386-201ENSMUST00000117677 124 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm14564-201ENSMUST00000122159 294 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm26104-201ENSMUST00000157250 108 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm22558-201ENSMUST00000157326 95 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm23554-201ENSMUST00000157818 110 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm22192-201ENSMUST00000175128 85 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm25632-201ENSMUST00000083112 85 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Mir193a-201ENSMUST00000083461 66 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Msx1P13297 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Msx1P13297 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Msx1P13297 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.12□□□□□ -1.75
Msx1P13297 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Msx1P13297 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Msx1P13297 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx1P13297 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Msx1P13297 Gm25169-201ENSMUST00000104190 129 ntBASIC4.11□□□□□ -1.75
Msx1P13297 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Msx1P13297 Gm25177-201ENSMUST00000122634 117 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Gm10059-201ENSMUST00000131139 171 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Gm22792-201ENSMUST00000157225 133 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Gm24747-201ENSMUST00000157835 87 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Gm25447-201ENSMUST00000158997 128 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Msx1P13297 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.11□□□□□ -1.75
Msx1P13297 Gm37097-201ENSMUST00000193676 336 ntBASIC4.11□□□□□ -1.75
Msx1P13297 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.11□□□□□ -1.75
Msx1P13297 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.11□□□□□ -1.75
Msx1P13297 mt-Ta-201ENSMUST00000082398 69 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Gm23727-201ENSMUST00000083352 164 ntBASIC4.11□□□□□ -1.75
Msx1P13297 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Msx1P13297 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Msx1P13297 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Msx1P13297 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Msx1P13297 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Msx1P13297 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Msx1P13297 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx1P13297 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Msx1P13297 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.11□□□□□ -1.75
Msx1P13297 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Msx1P13297 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Msx1P13297 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.1□□□□□ -1.75
Msx1P13297 Gm11644-201ENSMUST00000119735 150 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC4.1□□□□□ -1.75
Msx1P13297 Gm26001-201ENSMUST00000157989 103 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Gm24056-201ENSMUST00000158617 146 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Gm10292-201ENSMUST00000183142 581 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC4.1□□□□□ -1.75
Msx1P13297 Mir129b-201ENSMUST00000197461 65 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Gm24625-201ENSMUST00000082622 130 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Mir218-1-201ENSMUST00000083669 110 ntBASIC4.1□□□□□ -1.75
Msx1P13297 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Msx1P13297 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Msx1P13297 Gm45039-201ENSMUST00000209181 3477 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Msx1P13297 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Msx1P13297 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Msx1P13297 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Msx1P13297 Snora64-201ENSMUST00000104521 134 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Mir105-201ENSMUST00000104655 80 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Msx1P13297 Gm6071-201ENSMUST00000119561 440 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm14649-201ENSMUST00000121814 324 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm25045-201ENSMUST00000122670 99 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm26020-201ENSMUST00000122729 183 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC4.09□□□□□ -1.75
Msx1P13297 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.09□□□□□ -1.75
Msx1P13297 Gm22378-201ENSMUST00000157481 111 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm22968-201ENSMUST00000157955 118 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm23638-201ENSMUST00000175073 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm23158-201ENSMUST00000175076 126 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms