Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm35212-201ENSMUST00000196672 606 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm44384-201ENSMUST00000200208 114 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.1□□□□□ -2.07
Lire1P11260 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.1□□□□□ -2.07
Lire1P11260 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.1□□□□□ -2.07
Lire1P11260 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Mir429-201ENSMUST00000083493 83 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm25628-201ENSMUST00000084002 105 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Lire1P11260 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.1□□□□□ -2.07
Lire1P11260 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Lire1P11260 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
Lire1P11260 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Lire1P11260 Gm15266-201ENSMUST00000119635 255 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm12779-201ENSMUST00000121496 143 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm14362-201ENSMUST00000121679 273 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm15365-201ENSMUST00000122392 300 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm15254-201ENSMUST00000149567 273 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Lire1P11260 Mir6406-201ENSMUST00000183592 120 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Mir6905-201ENSMUST00000184228 70 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.09□□□□□ -2.07
Lire1P11260 Gm37641-201ENSMUST00000193837 239 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.09□□□□□ -2.07
Lire1P11260 Gm9402-201ENSMUST00000196849 388 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm18971-201ENSMUST00000197240 374 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm43676-201ENSMUST00000197532 540 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm42960-201ENSMUST00000202160 241 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Lire1P11260 Gm18854-201ENSMUST00000211196 329 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm24661-201ENSMUST00000083205 104 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm25651-201ENSMUST00000083782 119 ntBASIC2.09□□□□□ -2.07
Lire1P11260 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Lire1P11260 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Lire1P11260 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lire1P11260 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Lire1P11260 Gm25876-201ENSMUST00000104329 119 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm12941-201ENSMUST00000117934 220 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm13588-201ENSMUST00000120026 135 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm13433-201ENSMUST00000121701 240 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm14402-201ENSMUST00000122217 508 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lire1P11260 Gm25035-201ENSMUST00000175414 77 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm22264-201ENSMUST00000178200 107 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.08□□□□□ -2.08
Lire1P11260 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm43512-201ENSMUST00000198495 176 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Lire1P11260 Gm44128-201ENSMUST00000204909 219 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm44135-201ENSMUST00000205221 368 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.08□□□□□ -2.08
Lire1P11260 Ear14-201ENSMUST00000049559 468 ntBASIC2.08□□□□□ -2.08
Lire1P11260 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lire1P11260 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Lire1P11260 Gm13439-201ENSMUST00000117541 409 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.07□□□□□ -2.08
Lire1P11260 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.07□□□□□ -2.08
Lire1P11260 Gm24480-201ENSMUST00000157442 103 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm24783-201ENSMUST00000157639 100 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm22338-201ENSMUST00000157715 129 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm7258-201ENSMUST00000179317 300 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.07□□□□□ -2.08
Lire1P11260 Gm44910-201ENSMUST00000208451 396 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm45366-201ENSMUST00000209828 384 ntBASIC2.07□□□□□ -2.08
Lire1P11260 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.07□□□□□ -2.08
Lire1P11260 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.07□□□□□ -2.08
Lire1P11260 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Gm10360-201ENSMUST00000097219 272 ntBASIC2.07□□□□□ -2.08
Lire1P11260 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Lire1P11260 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Lire1P11260 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Lire1P11260 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Lire1P11260 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.06□□□□□ -2.08
Lire1P11260 Gm22731-201ENSMUST00000158086 94 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm5277-201ENSMUST00000164923 556 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm25956-201ENSMUST00000175115 217 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm23725-201ENSMUST00000177876 107 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Mir3569-201ENSMUST00000185080 58 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm44482-201ENSMUST00000199232 103 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm17990-201ENSMUST00000211728 553 ntBASIC2.06□□□□□ -2.08
Lire1P11260 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.06□□□□□ -2.08
Lire1P11260 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Gm23093-201ENSMUST00000083450 102 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Mir322-201ENSMUST00000083484 95 ntBASIC2.06□□□□□ -2.08
Lire1P11260 Mir222-201ENSMUST00000083537 79 ntBASIC2.06□□□□□ -2.08
Lire1P11260 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Lire1P11260 Mir223-201ENSMUST00000102112 110 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Gm26077-201ENSMUST00000104064 123 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Gm12956-201ENSMUST00000122184 414 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Gm25384-201ENSMUST00000157807 105 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.05□□□□□ -2.08
Lire1P11260 Gm27490-201ENSMUST00000184754 128 ntBASIC2.05□□□□□ -2.08
Lire1P11260 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.05□□□□□ -2.08
Lire1P11260 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms