Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm13560-201ENSMUST00000121865 329 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Mir1936-201ENSMUST00000158699 93 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm23053-201ENSMUST00000175136 96 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm27668-201ENSMUST00000184188 120 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Mir3068-202ENSMUST00000197755 79 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm43264-201ENSMUST00000202284 325 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Snord22-201ENSMUST00000083153 126 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm23727-201ENSMUST00000083352 164 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
Hoxd3P09027 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxd3P09027 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.42□□□□□ -1.86
Hoxd3P09027 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm23202-201ENSMUST00000104376 129 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm15214-201ENSMUST00000122155 470 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm22281-201ENSMUST00000157198 103 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm22789-201ENSMUST00000157884 130 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm22946-201ENSMUST00000158558 82 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm24056-201ENSMUST00000158617 146 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm13249-201ENSMUST00000177803 345 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm13144-201ENSMUST00000179385 345 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Mir6371-201ENSMUST00000184470 111 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Mir6933-201ENSMUST00000184982 81 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm37050-201ENSMUST00000193464 466 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd3P09027 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Hoxd3P09027 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd3P09027 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.41□□□□□ -1.86
Hoxd3P09027 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Hoxd3P09027 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.4□□□□□ -1.86
Hoxd3P09027 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Hoxd3P09027 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.4□□□□□ -1.86
Hoxd3P09027 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hoxd3P09027 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hoxd3P09027 Gm26367-201ENSMUST00000104165 132 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm22493-201ENSMUST00000104494 132 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm14491-201ENSMUST00000121919 199 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm22560-201ENSMUST00000157332 120 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm23905-201ENSMUST00000157568 109 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm23585-201ENSMUST00000157656 102 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm24388-201ENSMUST00000177872 107 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm27834-201ENSMUST00000183427 125 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm17779-201ENSMUST00000213395 394 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm23244-201ENSMUST00000083375 92 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.4□□□□□ -1.87
Hoxd3P09027 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Hoxd3P09027 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Hoxd3P09027 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hoxd3P09027 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm12571-201ENSMUST00000118132 243 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm14649-201ENSMUST00000121814 324 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm23183-201ENSMUST00000122595 323 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm26020-201ENSMUST00000122729 183 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm10444-201ENSMUST00000126708 148 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm23718-201ENSMUST00000157350 307 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm24601-201ENSMUST00000157970 143 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm22983-201ENSMUST00000158308 104 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm27934-201ENSMUST00000158795 63 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms