Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23670-201ENSMUST00000157469 119 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm25883-201ENSMUST00000157781 271 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm24409-201ENSMUST00000157881 152 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm16561-201ENSMUST00000163001 192 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm25361-201ENSMUST00000179358 76 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm9022-202ENSMUST00000183285 483 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm29397-201ENSMUST00000185205 333 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm29665-201ENSMUST00000191457 528 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm37338-201ENSMUST00000191986 127 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm23055-201ENSMUST00000082805 94 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm22973-201ENSMUST00000083298 191 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm14577-201ENSMUST00000121134 256 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm23585-201ENSMUST00000157656 102 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm23262-201ENSMUST00000158323 168 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm24577-201ENSMUST00000158580 63 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm17153-201ENSMUST00000171314 490 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm27521-201ENSMUST00000184022 64 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.82□□□□□ -1.96
Col3a1P08121 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm7871-201ENSMUST00000195346 618 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm19177-201ENSMUST00000204520 613 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm44811-201ENSMUST00000209120 228 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 Gm30674-201ENSMUST00000214523 392 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.82□□□□□ -1.96
Col3a1P08121 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col3a1P08121 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.81□□□□□ -1.96
Col3a1P08121 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col3a1P08121 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col3a1P08121 Gm22831-201ENSMUST00000102473 109 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm15526-201ENSMUST00000112504 204 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm12509-201ENSMUST00000118033 609 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm14541-201ENSMUST00000118985 157 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm14792-201ENSMUST00000119725 258 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm24750-201ENSMUST00000157843 104 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm24858-201ENSMUST00000158058 323 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm23223-201ENSMUST00000158119 127 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm22435-201ENSMUST00000158552 128 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm17528-201ENSMUST00000171026 239 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col3a1P08121 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col3a1P08121 Gm37029-201ENSMUST00000195773 239 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.81□□□□□ -1.96
Col3a1P08121 Gm45207-201ENSMUST00000207469 145 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Gm33654-201ENSMUST00000221704 215 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 AC133598.4-202ENSMUST00000225267 469 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col3a1P08121 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col3a1P08121 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col3a1P08121 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Col3a1P08121 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col3a1P08121 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.81□□□□□ -1.96
Col3a1P08121 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col3a1P08121 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col3a1P08121 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Col3a1P08121 Gm15844-201ENSMUST00000118016 576 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm14566-201ENSMUST00000118915 321 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm12512-201ENSMUST00000119620 217 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm13588-201ENSMUST00000120026 135 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm13345-201ENSMUST00000121928 228 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm13725-201ENSMUST00000122139 207 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.8□□□□□ -1.96
Col3a1P08121 Gm25425-201ENSMUST00000157611 96 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm25666-201ENSMUST00000157702 107 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm25384-201ENSMUST00000157807 105 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm22891-201ENSMUST00000158641 164 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm27747-201ENSMUST00000184707 85 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Mir7017-201ENSMUST00000184894 62 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm21673-201ENSMUST00000186640 436 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm21135-201ENSMUST00000189023 436 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col3a1P08121 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.8□□□□□ -1.96
Col3a1P08121 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm23721-201ENSMUST00000083005 107 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Snord47-201ENSMUST00000083034 77 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Gm26164-201ENSMUST00000083793 104 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col3a1P08121 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col3a1P08121 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.8□□□□□ -1.96
Col3a1P08121 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms