Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Gm28849-201ENSMUST00000188127 174 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Gm28848-201ENSMUST00000189984 168 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Gm28330-201ENSMUST00000190353 171 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.84□□□□□ -1.79
Vti1aO89116 Gm44084-201ENSMUST00000203947 409 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Gm24152-201ENSMUST00000082764 163 ntBASIC3.84□□□□□ -1.79
Vti1aO89116 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Vti1aO89116 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.84□□□□□ -1.8
Vti1aO89116 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Vti1aO89116 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Vti1aO89116 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vti1aO89116 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Vti1aO89116 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vti1aO89116 Mdga2-203ENSMUST00000113942 423 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm14838-201ENSMUST00000118913 248 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm25543-201ENSMUST00000122678 312 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm22145-201ENSMUST00000157396 148 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm24138-201ENSMUST00000157572 114 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm22842-201ENSMUST00000157709 118 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm22336-201ENSMUST00000157719 107 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm23640-201ENSMUST00000157860 104 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm25860-201ENSMUST00000158252 126 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm22118-201ENSMUST00000175593 171 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vti1aO89116 Gm42578-201ENSMUST00000199960 194 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.83□□□□□ -1.8
Vti1aO89116 Gm18015-201ENSMUST00000214879 316 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Gm26327-201ENSMUST00000093724 111 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.83□□□□□ -1.8
Vti1aO89116 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vti1aO89116 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
Vti1aO89116 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vti1aO89116 Mir541-201ENSMUST00000102097 90 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Vti1aO89116 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Vti1aO89116 Gm22784-201ENSMUST00000104088 132 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm25168-201ENSMUST00000104189 132 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm26387-201ENSMUST00000104238 132 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Mir291a-201ENSMUST00000104815 82 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm12797-201ENSMUST00000118645 273 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm13541-201ENSMUST00000119519 283 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm12721-201ENSMUST00000120621 268 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.82□□□□□ -1.8
Vti1aO89116 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.82□□□□□ -1.8
Vti1aO89116 Gm25390-201ENSMUST00000157341 103 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm6947-201ENSMUST00000186254 78 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.82□□□□□ -1.8
Vti1aO89116 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.82□□□□□ -1.8
Vti1aO89116 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.82□□□□□ -1.8
Vti1aO89116 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vti1aO89116 Gm25930-201ENSMUST00000082785 107 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Mir101b-201ENSMUST00000083622 97 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Mir137-201ENSMUST00000083635 73 ntBASIC3.82□□□□□ -1.8
Vti1aO89116 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vti1aO89116 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vti1aO89116 Mir872-201ENSMUST00000104728 81 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vti1aO89116 Gm12934-201ENSMUST00000119221 343 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm23331-201ENSMUST00000157423 108 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm25066-201ENSMUST00000158145 123 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vti1aO89116 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm43680-201ENSMUST00000199466 340 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm36776-201ENSMUST00000207006 203 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vti1aO89116 Gm23297-201ENSMUST00000083184 127 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Gm25630-201ENSMUST00000084000 162 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vti1aO89116 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.81□□□□□ -1.8
Vti1aO89116 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vti1aO89116 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Vti1aO89116 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Vti1aO89116 Gm15846-201ENSMUST00000116022 320 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm9119-201ENSMUST00000118866 495 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm12417-201ENSMUST00000119153 403 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm14402-201ENSMUST00000122217 508 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm25269-201ENSMUST00000122601 104 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm23391-201ENSMUST00000157579 104 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm2962-201ENSMUST00000159266 336 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm10075-201ENSMUST00000162030 545 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.8□□□□□ -1.8
Vti1aO89116 Gm5329-201ENSMUST00000186898 463 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm18000-201ENSMUST00000212153 800 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.8□□□□□ -1.8
Vti1aO89116 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.8□□□□□ -1.8
Vti1aO89116 Gm9765-201ENSMUST00000043170 321 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm22294-201ENSMUST00000083308 104 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Gm23727-201ENSMUST00000083352 164 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.8□□□□□ -1.8
Vti1aO89116 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Vti1aO89116 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 200.5 ms