Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm26278-201ENSMUST00000157098 132 ntBASIC2.16□□□□□ -2.06
ClppO88696 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ClppO88696 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ClppO88696 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.16□□□□□ -2.06
ClppO88696 Gm27539-201ENSMUST00000184971 224 ntBASIC2.16□□□□□ -2.06
ClppO88696 Gm28506-201ENSMUST00000189937 150 ntBASIC2.16□□□□□ -2.06
ClppO88696 Gm9402-201ENSMUST00000196849 388 ntBASIC2.16□□□□□ -2.06
ClppO88696 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ClppO88696 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.16□□□□□ -2.06
ClppO88696 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.16□□□□□ -2.06
ClppO88696 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.16□□□□□ -2.06
ClppO88696 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ClppO88696 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ClppO88696 Mir3096-201ENSMUST00000116685 71 ntBASIC2.15□□□□□ -2.07
ClppO88696 Gm12255-201ENSMUST00000117184 284 ntBASIC2.15□□□□□ -2.07
ClppO88696 Gm26102-201ENSMUST00000157251 284 ntBASIC2.15□□□□□ -2.07
ClppO88696 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.15□□□□□ -2.07
ClppO88696 Mir7226-201ENSMUST00000184953 60 ntBASIC2.15□□□□□ -2.07
ClppO88696 Gm29352-201ENSMUST00000188054 544 ntBASIC2.15□□□□□ -2.07
ClppO88696 Gm37377-201ENSMUST00000191733 304 ntBASIC2.15□□□□□ -2.07
ClppO88696 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.15□□□□□ -2.07
ClppO88696 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.15□□□□□ -2.07
ClppO88696 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ClppO88696 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ClppO88696 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ClppO88696 Gm12550-201ENSMUST00000118478 329 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm15443-201ENSMUST00000118947 820 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm14770-201ENSMUST00000122197 312 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.14□□□□□ -2.07
ClppO88696 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.14□□□□□ -2.07
ClppO88696 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.14□□□□□ -2.07
ClppO88696 Gm23411-201ENSMUST00000157988 62 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm24770-201ENSMUST00000158505 92 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm25368-201ENSMUST00000158847 131 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.14□□□□□ -2.07
ClppO88696 Gm18588-201ENSMUST00000177308 492 ntBASIC2.14□□□□□ -2.07
ClppO88696 Mir6341-201ENSMUST00000183490 121 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm27624-201ENSMUST00000185047 177 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm37337-201ENSMUST00000192601 993 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm43510-201ENSMUST00000197922 353 ntBASIC2.14□□□□□ -2.07
ClppO88696 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm7039-201ENSMUST00000205138 346 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm18617-201ENSMUST00000222311 259 ntBASIC2.14□□□□□ -2.07
ClppO88696 Ear14-201ENSMUST00000049559 468 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm24661-201ENSMUST00000083205 104 ntBASIC2.14□□□□□ -2.07
ClppO88696 Gm23040-201ENSMUST00000083869 163 ntBASIC2.14□□□□□ -2.07
ClppO88696 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ClppO88696 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ClppO88696 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm23472-201ENSMUST00000101806 191 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm26077-201ENSMUST00000104064 123 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.13□□□□□ -2.07
ClppO88696 Gm14355-201ENSMUST00000117352 264 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm13331-201ENSMUST00000117500 448 ntBASIC2.13□□□□□ -2.07
ClppO88696 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm23641-201ENSMUST00000157857 101 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm24497-201ENSMUST00000177868 191 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm25939-201ENSMUST00000179876 191 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm9227-201ENSMUST00000194733 566 ntBASIC2.13□□□□□ -2.07
ClppO88696 Mir3068-202ENSMUST00000197755 79 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm3724-201ENSMUST00000197957 349 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm44320-201ENSMUST00000199276 86 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm44446-201ENSMUST00000204864 255 ntBASIC2.13□□□□□ -2.07
ClppO88696 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.13□□□□□ -2.07
ClppO88696 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.13□□□□□ -2.07
ClppO88696 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm9318-201ENSMUST00000222444 438 ntBASIC2.13□□□□□ -2.07
ClppO88696 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm25475-201ENSMUST00000082825 180 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm23444-201ENSMUST00000082922 191 ntBASIC2.13□□□□□ -2.07
ClppO88696 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ClppO88696 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
ClppO88696 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Gm23202-201ENSMUST00000104376 129 ntBASIC2.12□□□□□ -2.07
ClppO88696 Mir743b-201ENSMUST00000104751 77 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm13728-201ENSMUST00000117471 400 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm16242-201ENSMUST00000117741 334 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm13433-201ENSMUST00000121701 240 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm15281-201ENSMUST00000125181 351 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm38395-201ENSMUST00000199904 830 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm44083-201ENSMUST00000203114 337 ntBASIC2.12□□□□□ -2.07
ClppO88696 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.12□□□□□ -2.07
ClppO88696 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.12□□□□□ -2.07
ClppO88696 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.12□□□□□ -2.07
ClppO88696 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ClppO88696 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.12□□□□□ -2.07
ClppO88696 Gm24098-201ENSMUST00000102075 109 ntBASIC2.11□□□□□ -2.07
ClppO88696 Gm25381-201ENSMUST00000102078 109 ntBASIC2.11□□□□□ -2.07
ClppO88696 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ClppO88696 Gm15899-201ENSMUST00000128586 238 ntBASIC2.11□□□□□ -2.07
ClppO88696 Gm16355-201ENSMUST00000128606 231 ntBASIC2.11□□□□□ -2.07
ClppO88696 Gm7925-201ENSMUST00000166690 401 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms