Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Mir8116-201ENSMUST00000184134 97 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm43652-201ENSMUST00000196219 675 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm42958-201ENSMUST00000197595 318 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Mir3068-202ENSMUST00000197755 79 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm43026-201ENSMUST00000202972 325 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm45387-201ENSMUST00000209792 632 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.99□□□□□ -2.25
Sdc4O35988 Gm18488-201ENSMUST00000215082 364 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Gm22575-201ENSMUST00000082981 110 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Sdc4O35988 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Sdc4O35988 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.99□□□□□ -2.25
Sdc4O35988 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Sdc4O35988 Gm25170-201ENSMUST00000104191 129 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm25274-201ENSMUST00000104296 135 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Snord71-201ENSMUST00000104361 85 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm14785-201ENSMUST00000120185 539 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm26414-201ENSMUST00000157674 269 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Mir6341-201ENSMUST00000183490 121 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm43199-201ENSMUST00000200019 307 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm44487-201ENSMUST00000205145 325 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm18774-201ENSMUST00000218269 601 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm23454-201ENSMUST00000083332 133 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Gm23741-201ENSMUST00000097237 171 ntBASIC0.98□□□□□ -2.25
Sdc4O35988 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Sdc4O35988 Gm22678-201ENSMUST00000116974 101 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm15175-201ENSMUST00000117629 132 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm15177-201ENSMUST00000120491 577 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm14215-201ENSMUST00000120578 221 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.97□□□□□ -2.25
Sdc4O35988 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Sdc4O35988 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.97□□□□□ -2.25
Sdc4O35988 Mir1942-201ENSMUST00000157274 63 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm24997-201ENSMUST00000157910 105 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm24573-201ENSMUST00000175499 112 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm23648-201ENSMUST00000180301 107 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm9236-201ENSMUST00000196892 587 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.97□□□□□ -2.25
Sdc4O35988 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm45101-201ENSMUST00000208327 232 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm44554-201ENSMUST00000208738 147 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm8125-201ENSMUST00000216602 738 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Sdc4O35988 Gm23506-201ENSMUST00000083077 107 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Gm26265-201ENSMUST00000083277 135 ntBASIC0.97□□□□□ -2.25
Sdc4O35988 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
Sdc4O35988 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Sdc4O35988 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm23202-201ENSMUST00000104376 129 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm13885-201ENSMUST00000117569 187 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm12639-201ENSMUST00000121400 493 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm8121-201ENSMUST00000153583 499 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm22765-201ENSMUST00000158371 128 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Traj60-201ENSMUST00000167781 54 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc4O35988 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Sdc4O35988 Gm27668-201ENSMUST00000184188 120 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc4O35988 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc4O35988 Gm23042-201ENSMUST00000083866 101 ntBASIC0.96□□□□□ -2.26
Sdc4O35988 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Sdc4O35988 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Sdc4O35988 Gm12636-201ENSMUST00000117395 624 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm12016-201ENSMUST00000119079 681 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm15452-201ENSMUST00000119877 240 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm6025-201ENSMUST00000121517 201 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.95□□□□□ -2.26
Sdc4O35988 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm24754-201ENSMUST00000177997 107 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Mir6380-201ENSMUST00000184334 81 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.95□□□□□ -2.26
Sdc4O35988 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Sdc4O35988 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm46994-201ENSMUST00000221523 219 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm5955-201ENSMUST00000222712 219 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm23517-201ENSMUST00000082830 192 ntBASIC0.95□□□□□ -2.26
Sdc4O35988 Gm22003-201ENSMUST00000101885 107 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Sdc4O35988 Gm14558-201ENSMUST00000117458 381 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 Gm15659-201ENSMUST00000118881 341 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 AA413626-201ENSMUST00000121125 494 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 Gm15878-201ENSMUST00000127561 306 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 Gm16129-201ENSMUST00000152628 486 ntBASIC0.94□□□□□ -2.26
Sdc4O35988 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Sdc4O35988 Gm17377-201ENSMUST00000165184 207 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms