Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm15002-201ENSMUST00000118406 452 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm11253-201ENSMUST00000118486 201 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm13443-201ENSMUST00000120770 555 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm17100-201ENSMUST00000168963 272 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm5967-201ENSMUST00000172723 494 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nedd9O35177 Gm25450-201ENSMUST00000179144 107 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Mir6481-201ENSMUST00000184617 110 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Mir7062-201ENSMUST00000185038 66 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm28744-201ENSMUST00000189939 340 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm29140-201ENSMUST00000190187 476 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.4□□□□□ -1.87
Nedd9O35177 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.4□□□□□ -1.87
Nedd9O35177 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
Nedd9O35177 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Nedd9O35177 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Nedd9O35177 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Nedd9O35177 Gm23747-201ENSMUST00000104228 131 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm12071-201ENSMUST00000121968 469 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nedd9O35177 Gm25333-201ENSMUST00000158035 246 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm37746-201ENSMUST00000193249 198 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.39□□□□□ -1.87
Nedd9O35177 Gm44425-201ENSMUST00000203739 429 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm44010-201ENSMUST00000204432 331 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.39□□□□□ -1.87
Nedd9O35177 Gm44594-201ENSMUST00000208982 407 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.39□□□□□ -1.87
Nedd9O35177 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.39□□□□□ -1.87
Nedd9O35177 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nedd9O35177 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nedd9O35177 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nedd9O35177 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Nedd9O35177 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Nedd9O35177 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nedd9O35177 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nedd9O35177 Gm25376-201ENSMUST00000104340 133 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm11572-201ENSMUST00000119164 120 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm26088-201ENSMUST00000157896 131 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm20672-201ENSMUST00000176605 261 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm20651-201ENSMUST00000177219 329 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Mir7k-201ENSMUST00000184115 110 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm37713-201ENSMUST00000191746 198 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm9377-201ENSMUST00000207227 623 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nedd9O35177 Gm22358-201ENSMUST00000082877 122 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Gm25188-201ENSMUST00000083913 122 ntBASIC3.38□□□□□ -1.87
Nedd9O35177 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nedd9O35177 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Nedd9O35177 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nedd9O35177 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nedd9O35177 Gm22779-201ENSMUST00000104085 107 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm14877-201ENSMUST00000119803 478 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.37□□□□□ -1.87
Nedd9O35177 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nedd9O35177 Gm23713-201ENSMUST00000157353 70 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm22615-201ENSMUST00000158102 70 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm23355-201ENSMUST00000177614 107 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm23148-201ENSMUST00000180367 107 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm28000-201ENSMUST00000184380 85 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.37□□□□□ -1.87
Nedd9O35177 Gm28921-201ENSMUST00000190219 378 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm1833-201ENSMUST00000191608 682 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm42672-201ENSMUST00000197821 352 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm44964-201ENSMUST00000207011 273 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm39147-201ENSMUST00000211376 465 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Gm25258-201ENSMUST00000083049 107 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nedd9O35177 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nedd9O35177 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.37□□□□□ -1.87
Nedd9O35177 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nedd9O35177 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm15190-201ENSMUST00000120855 276 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm23586-201ENSMUST00000157657 123 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm22766-201ENSMUST00000158372 99 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm37417-201ENSMUST00000195257 454 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.36□□□□□ -1.87
Nedd9O35177 Gm45879-201ENSMUST00000212521 392 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.36□□□□□ -1.87
Nedd9O35177 Gm25078-201ENSMUST00000082530 107 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Mir32-201ENSMUST00000083610 70 ntBASIC3.36□□□□□ -1.87
Nedd9O35177 Gm26314-201ENSMUST00000083891 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms