Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm11819-201ENSMUST00000122192 372 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm14770-201ENSMUST00000122197 312 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm23540-201ENSMUST00000157543 164 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm22516-201ENSMUST00000158266 124 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm23759-201ENSMUST00000158351 268 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm16111-201ENSMUST00000162128 285 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm24086-201ENSMUST00000175171 98 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm23921-201ENSMUST00000175258 107 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm37923-201ENSMUST00000191624 161 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm19620-201ENSMUST00000195972 434 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm44520-201ENSMUST00000205447 802 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm44824-201ENSMUST00000207021 229 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm21007-201ENSMUST00000221024 326 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm23625-201ENSMUST00000082457 100 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm22979-201ENSMUST00000082609 159 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Mir193a-201ENSMUST00000083461 66 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Gm26314-201ENSMUST00000083891 107 ntBASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Shisa8J3QNX5 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Mir499-201ENSMUST00000102357 79 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm24338-201ENSMUST00000104205 127 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm12686-201ENSMUST00000120546 397 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm25664-201ENSMUST00000157697 107 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm22433-201ENSMUST00000158550 142 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm7582-201ENSMUST00000160831 603 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm22858-201ENSMUST00000174972 76 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm24818-201ENSMUST00000175093 161 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm20660-201ENSMUST00000177515 289 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm21893-201ENSMUST00000179119 397 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm43402-201ENSMUST00000197159 159 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm43239-201ENSMUST00000200131 201 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm25482-201ENSMUST00000083225 107 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm26166-201ENSMUST00000083788 107 ntBASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Shisa8J3QNX5 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Shisa8J3QNX5 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm6574-201ENSMUST00000120037 362 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm13581-201ENSMUST00000120675 278 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm26100-201ENSMUST00000157245 127 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm24959-201ENSMUST00000157924 146 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm24005-201ENSMUST00000158459 296 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm17186-201ENSMUST00000171742 456 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm20651-201ENSMUST00000177219 329 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Mir6481-201ENSMUST00000184617 110 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm29602-201ENSMUST00000186887 442 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm28650-201ENSMUST00000188413 411 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm37007-201ENSMUST00000194234 319 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm45860-201ENSMUST00000212700 334 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm22358-201ENSMUST00000082877 122 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Gm25188-201ENSMUST00000083913 122 ntBASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Shisa8J3QNX5 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm23705-201ENSMUST00000104370 130 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm24683-201ENSMUST00000104840 88 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm13504-201ENSMUST00000117490 316 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm6762-201ENSMUST00000121769 289 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Mir1942-201ENSMUST00000157274 63 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm23713-201ENSMUST00000157353 70 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm23667-201ENSMUST00000157466 120 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm22654-201ENSMUST00000157874 105 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm22615-201ENSMUST00000158102 70 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm25835-201ENSMUST00000158917 144 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm17966-201ENSMUST00000193453 594 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm37361-201ENSMUST00000194345 132 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm37431-201ENSMUST00000195102 111 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Mir376a-201ENSMUST00000197584 68 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm44010-201ENSMUST00000204432 331 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm45420-201ENSMUST00000211243 425 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm23850-201ENSMUST00000083830 169 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Gm10161-201ENSMUST00000091506 204 ntBASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shisa8J3QNX5 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 572.5 ms