Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Mir669g-201ENSMUST00000116809 123 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm13396-201ENSMUST00000120617 271 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm16358-201ENSMUST00000146046 210 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm23586-201ENSMUST00000157657 123 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm43512-201ENSMUST00000198495 176 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Gm23727-201ENSMUST00000083352 164 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.32□□□□□ -2.04
Shank1D3YZU1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shank1D3YZU1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm13880-201ENSMUST00000118421 474 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm25198-201ENSMUST00000178574 110 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm26180-201ENSMUST00000179942 107 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm27410-201ENSMUST00000183851 115 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm37162-201ENSMUST00000191708 551 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm22806-201ENSMUST00000082738 136 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm22353-201ENSMUST00000083918 136 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Gm25207-201ENSMUST00000093745 107 ntBASIC2.31□□□□□ -2.04
Shank1D3YZU1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Shank1D3YZU1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Shank1D3YZU1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm24635-201ENSMUST00000122712 128 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm23331-201ENSMUST00000157423 108 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm24061-201ENSMUST00000157489 120 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm24504-201ENSMUST00000157679 100 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm24885-201ENSMUST00000158783 270 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm7871-201ENSMUST00000195346 618 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm22245-201ENSMUST00000082479 103 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm25475-201ENSMUST00000082825 180 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm26329-201ENSMUST00000093723 110 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm14001-201ENSMUST00000118847 247 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm14013-201ENSMUST00000119006 270 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm23921-201ENSMUST00000175258 107 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm44520-201ENSMUST00000205447 802 ntBASIC2.3□□□□□ -2.04
Shank1D3YZU1 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.3□□□□□ -2.04
Shank1D3YZU1 Mir693-201ENSMUST00000102187 89 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm23256-201ENSMUST00000102235 110 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm11798-201ENSMUST00000119150 421 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm26102-201ENSMUST00000157251 284 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm25283-201ENSMUST00000157272 77 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Shank1D3YZU1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm42594-201ENSMUST00000199511 246 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm44655-201ENSMUST00000207768 423 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm9818-201ENSMUST00000050900 255 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm22247-201ENSMUST00000082476 131 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm24948-201ENSMUST00000082866 207 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm10212-201ENSMUST00000087884 324 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm13711-201ENSMUST00000119708 453 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm25325-201ENSMUST00000122559 86 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm23889-201ENSMUST00000122689 104 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm24601-201ENSMUST00000157970 143 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm24084-201ENSMUST00000175173 137 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm22131-201ENSMUST00000178415 94 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm28825-201ENSMUST00000186233 238 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm28951-201ENSMUST00000190742 313 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm38311-201ENSMUST00000192945 165 ntBASIC2.29□□□□□ -2.04
Shank1D3YZU1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms