Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.3□□□□□ -2.2
Chd3B1AR17 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.3□□□□□ -2.2
Chd3B1AR17 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Chd3B1AR17 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Chd3B1AR17 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Chd3B1AR17 Gm23650-201ENSMUST00000083355 70 ntBASIC1.3□□□□□ -2.2
Chd3B1AR17 Mir350-201ENSMUST00000083639 99 ntBASIC1.3□□□□□ -2.2
Chd3B1AR17 Gm23040-201ENSMUST00000083869 163 ntBASIC1.3□□□□□ -2.2
Chd3B1AR17 Gm25313-201ENSMUST00000101817 116 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Mir883a-201ENSMUST00000104824 76 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm25541-201ENSMUST00000116888 126 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm16053-201ENSMUST00000120511 188 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm25194-201ENSMUST00000177987 79 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm23287-201ENSMUST00000179427 116 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm23143-201ENSMUST00000180137 116 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm27676-201ENSMUST00000183669 61 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm9236-201ENSMUST00000196892 587 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm42623-201ENSMUST00000197225 379 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm43680-201ENSMUST00000199466 340 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm24871-201ENSMUST00000083099 116 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm23100-201ENSMUST00000083455 141 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Chd3B1AR17 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm10360-201ENSMUST00000097219 272 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.29□□□□□ -2.2
Chd3B1AR17 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Chd3B1AR17 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Mir6540-201ENSMUST00000184886 108 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm42647-201ENSMUST00000195939 459 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm43026-201ENSMUST00000202972 325 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm43955-201ENSMUST00000204332 142 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm44961-201ENSMUST00000207450 196 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Olfr197-201ENSMUST00000080031 926 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm24254-201ENSMUST00000083702 104 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm26175-201ENSMUST00000083794 131 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm25506-201ENSMUST00000104339 70 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Mir467h-201ENSMUST00000116759 121 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm6587-201ENSMUST00000120219 613 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm22082-201ENSMUST00000157587 161 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm22963-201ENSMUST00000157960 91 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm24846-201ENSMUST00000158033 108 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm23648-201ENSMUST00000180301 107 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm42834-201ENSMUST00000196845 256 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm43510-201ENSMUST00000197922 353 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm46136-201ENSMUST00000214730 565 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm23506-201ENSMUST00000083077 107 ntBASIC1.28□□□□□ -2.2
Chd3B1AR17 Gm11862-201ENSMUST00000119678 659 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm25768-201ENSMUST00000158570 98 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm25711-201ENSMUST00000158633 128 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm24878-201ENSMUST00000158782 104 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm26177-201ENSMUST00000178683 107 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm24137-201ENSMUST00000180055 79 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm22391-201ENSMUST00000180356 79 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Chd3B1AR17 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Chd3B1AR17 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm42805-201ENSMUST00000196158 276 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm10298-201ENSMUST00000074801 265 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm14558-201ENSMUST00000117458 381 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm14774-201ENSMUST00000117857 536 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm12656-201ENSMUST00000118149 577 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm14359-201ENSMUST00000118883 424 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm14360-201ENSMUST00000120670 393 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm9498-201ENSMUST00000140849 291 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm14368-201ENSMUST00000145305 415 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm22447-201ENSMUST00000158155 92 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm25035-201ENSMUST00000175414 77 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm27711-201ENSMUST00000183802 118 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Mir6399-201ENSMUST00000184050 84 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Chd3B1AR17 Gm45101-201ENSMUST00000208327 232 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.27□□□□□ -2.21
Chd3B1AR17 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Chd3B1AR17 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm24340-201ENSMUST00000104208 97 ntBASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm15167-201ENSMUST00000121997 187 ntBASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm20386-201ENSMUST00000174010 132 ntBASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm25156-201ENSMUST00000179809 79 ntBASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm23246-201ENSMUST00000083371 67 ntBASIC1.26□□□□□ -2.21
Chd3B1AR17 Gm25088-201ENSMUST00000101803 79 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm14835-201ENSMUST00000119039 315 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm23387-201ENSMUST00000158586 107 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Mir6335-201ENSMUST00000184081 98 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm36966-201ENSMUST00000192217 413 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm42807-201ENSMUST00000200141 329 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm42739-201ENSMUST00000200687 226 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms