Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm22978-201ENSMUST00000082607 160 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm24355-201ENSMUST00000082858 122 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Snora19-201ENSMUST00000082962 132 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm23658-201ENSMUST00000083233 132 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm22970-201ENSMUST00000083304 186 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm22297-201ENSMUST00000083312 106 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Mir767-201ENSMUST00000103256 107 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm22472-201ENSMUST00000104115 134 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Mir6938-201ENSMUST00000184173 63 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Trbv18-201ENSMUST00000194256 294 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm43563-201ENSMUST00000196761 198 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm42623-201ENSMUST00000197225 379 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm34779-201ENSMUST00000210036 263 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm25812-201ENSMUST00000082751 103 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm22507-201ENSMUST00000082773 160 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.64□□□□□ -1.83
Ccdc9bA3KGF9 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Gm23322-201ENSMUST00000104464 167 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Gm24067-201ENSMUST00000104514 85 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Gm23226-201ENSMUST00000116927 103 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Gm25908-201ENSMUST00000157624 98 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Mir3068-202ENSMUST00000197755 79 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Snora7a-201ENSMUST00000082629 140 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Gm25634-201ENSMUST00000082667 105 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc9bA3KGF9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm26418-201ENSMUST00000104275 137 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm24788-201ENSMUST00000104283 156 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm23202-201ENSMUST00000104376 129 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm14299-201ENSMUST00000117586 397 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm24892-201ENSMUST00000122747 104 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm24850-201ENSMUST00000158029 119 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm23476-201ENSMUST00000158881 274 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm26291-201ENSMUST00000158889 137 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm7592-201ENSMUST00000160674 627 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm7582-201ENSMUST00000160831 603 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm26097-201ENSMUST00000179642 93 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm21960-201ENSMUST00000181924 452 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Mir6385-201ENSMUST00000184295 105 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm27899-201ENSMUST00000184715 64 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm29597-201ENSMUST00000188035 308 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm37693-201ENSMUST00000194562 234 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm44352-201ENSMUST00000196358 110 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm23925-201ENSMUST00000082471 132 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm25789-201ENSMUST00000083294 76 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Gm25895-201ENSMUST00000083714 100 ntBASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc9bA3KGF9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm22497-201ENSMUST00000104499 131 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm13478-201ENSMUST00000118312 413 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm25066-201ENSMUST00000158145 123 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm22135-201ENSMUST00000158752 108 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm17113-201ENSMUST00000170118 171 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms