Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Mir669d-201ENSMUST00000104644 121 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm23206-201ENSMUST00000122720 184 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm23277-201ENSMUST00000157914 136 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm22510-201ENSMUST00000179304 79 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm26336-201ENSMUST00000179449 79 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm26390-201ENSMUST00000179628 79 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Gm43510-201ENSMUST00000197922 353 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trav3-4A0A075B654 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm23950-201ENSMUST00000104026 129 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm22780-201ENSMUST00000104084 132 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm23336-201ENSMUST00000117023 123 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm15162-201ENSMUST00000119325 283 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm15365-201ENSMUST00000122392 300 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm25325-201ENSMUST00000122559 86 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm16359-201ENSMUST00000124511 289 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm23858-201ENSMUST00000158384 106 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Mir6411-201ENSMUST00000183556 108 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm27587-201ENSMUST00000185116 163 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm37579-201ENSMUST00000194291 142 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm18598-201ENSMUST00000207724 597 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm23735-201ENSMUST00000082551 134 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Gm23645-201ENSMUST00000083228 108 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trav3-4A0A075B654 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm26338-201ENSMUST00000102372 110 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm25213-201ENSMUST00000102388 113 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm25421-201ENSMUST00000104218 164 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm23705-201ENSMUST00000104370 130 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm22713-201ENSMUST00000116895 130 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm14624-201ENSMUST00000117746 192 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm11219-201ENSMUST00000118565 358 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm26102-201ENSMUST00000157251 284 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm25224-201ENSMUST00000158195 68 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm16584-201ENSMUST00000159267 189 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm20438-201ENSMUST00000174441 329 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm42570-201ENSMUST00000195937 292 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
Trav3-4A0A075B654 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm22929-201ENSMUST00000175517 107 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm27342-201ENSMUST00000183530 109 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm29134-201ENSMUST00000186579 126 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm28337-201ENSMUST00000190425 666 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm31123-201ENSMUST00000192094 666 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm9251-201ENSMUST00000197202 628 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm44655-201ENSMUST00000207768 423 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav3-4A0A075B654 Mir695-201ENSMUST00000102261 109 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm23836-201ENSMUST00000104434 129 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm22488-201ENSMUST00000116811 127 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm12889-201ENSMUST00000118684 241 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm4732-201ENSMUST00000118778 473 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm15659-201ENSMUST00000118881 341 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm11471-201ENSMUST00000121824 198 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm11358-201ENSMUST00000122310 373 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm22227-201ENSMUST00000157356 259 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm24480-201ENSMUST00000157442 103 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm24780-201ENSMUST00000157635 143 ntBASIC0.47□□□□□ -2.33
Trav3-4A0A075B654 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms