Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm43914-201ENSMUST00000203592 594 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 Gm44128-201ENSMUST00000204909 219 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 Gm40810-201ENSMUST00000219149 253 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 Gm19441-201ENSMUST00000221545 330 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 AC158525.1-201ENSMUST00000223806 576 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.41□□□□□ -2.18
Trav12-3A0A075B648 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trav12-3A0A075B648 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm14656-201ENSMUST00000120342 502 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm13720-201ENSMUST00000120741 196 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm5396-201ENSMUST00000121222 532 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm14821-201ENSMUST00000121975 435 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm12317-201ENSMUST00000122307 319 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm22338-201ENSMUST00000157715 129 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm24237-201ENSMUST00000157790 132 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm22727-201ENSMUST00000158090 116 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm25956-201ENSMUST00000175115 217 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm21885-201ENSMUST00000178891 327 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Mir6399-201ENSMUST00000184050 84 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Mir195b-201ENSMUST00000184814 97 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm43405-201ENSMUST00000198642 337 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm43583-201ENSMUST00000199235 303 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.4□□□□□ -2.19
Trav12-3A0A075B648 Gm24172-201ENSMUST00000104127 117 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm22674-201ENSMUST00000104413 131 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm25727-201ENSMUST00000104522 131 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm13672-201ENSMUST00000117554 459 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm15799-201ENSMUST00000120899 289 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm25115-201ENSMUST00000157187 140 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm24480-201ENSMUST00000157442 103 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm22654-201ENSMUST00000157874 105 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm24191-201ENSMUST00000157977 122 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm27510-201ENSMUST00000158214 64 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm7953-201ENSMUST00000168278 469 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm24084-201ENSMUST00000175173 137 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm18696-201ENSMUST00000220103 274 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm10025-201ENSMUST00000079568 372 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm26457-201ENSMUST00000082678 78 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm24150-201ENSMUST00000082759 104 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Gm22622-201ENSMUST00000082870 129 ntBASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav12-3A0A075B648 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm24338-201ENSMUST00000104205 127 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm24282-201ENSMUST00000104232 66 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm13457-201ENSMUST00000117885 267 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm14364-201ENSMUST00000129209 267 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm22891-201ENSMUST00000158641 164 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm26501-201ENSMUST00000178307 107 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm26864-201ENSMUST00000181346 156 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Mir7074-201ENSMUST00000183884 63 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm5001-201ENSMUST00000204361 331 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 AC160865.1-201ENSMUST00000219873 151 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm25589-201ENSMUST00000082502 166 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm24151-201ENSMUST00000082758 141 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm22997-201ENSMUST00000082845 107 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm23097-201ENSMUST00000083448 105 ntBASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav12-3A0A075B648 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm12255-201ENSMUST00000117184 284 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm15067-201ENSMUST00000119534 156 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm23983-201ENSMUST00000157142 114 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm25059-201ENSMUST00000157367 117 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Mir3086-201ENSMUST00000175072 87 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm18588-201ENSMUST00000177308 492 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm21815-201ENSMUST00000178213 664 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm20874-201ENSMUST00000178356 663 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm26335-201ENSMUST00000178449 107 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Mir7013-201ENSMUST00000183540 72 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm27773-201ENSMUST00000184087 78 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm37533-201ENSMUST00000193848 545 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm44387-201ENSMUST00000196298 145 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 Gm45754-201ENSMUST00000212380 279 ntBASIC1.37□□□□□ -2.19
Trav12-3A0A075B648 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms