Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm25168-201ENSMUST00000104189 132 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm7164-201ENSMUST00000117503 450 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm22791-201ENSMUST00000157232 145 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm22891-201ENSMUST00000158641 164 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm21737-201ENSMUST00000178112 664 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm21815-201ENSMUST00000178213 664 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm20874-201ENSMUST00000178356 663 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm20901-201ENSMUST00000180177 664 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm21647-201ENSMUST00000189755 664 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm43402-201ENSMUST00000197159 159 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm18341-201ENSMUST00000197538 622 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm43976-201ENSMUST00000203637 235 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm44687-201ENSMUST00000204975 235 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Gm24043-201ENSMUST00000083108 116 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Snord14d-201ENSMUST00000083424 86 ntBASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
H2afb2S4R1M3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm42606-201ENSMUST00000114209 239 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm5937-201ENSMUST00000119715 643 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm14069-201ENSMUST00000120815 229 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm13903-201ENSMUST00000120945 193 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm23391-201ENSMUST00000157579 104 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm27510-201ENSMUST00000158214 64 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm15900-201ENSMUST00000161584 342 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm27624-201ENSMUST00000185047 177 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm7871-201ENSMUST00000195346 618 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm42925-201ENSMUST00000197359 285 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm26166-201ENSMUST00000083788 107 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm25207-201ENSMUST00000093745 107 ntBASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.18□□□□□ -2.06
H2afb2S4R1M3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm12793-201ENSMUST00000119268 292 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm14852-201ENSMUST00000120065 647 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm14287-201ENSMUST00000121060 117 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm23184-201ENSMUST00000122594 131 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm23191-201ENSMUST00000179147 107 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm29231-201ENSMUST00000179850 319 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm6060-201ENSMUST00000188671 251 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm28090-201ENSMUST00000189458 664 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Mir497-201ENSMUST00000200557 84 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm23404-201ENSMUST00000082543 97 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Gm26164-201ENSMUST00000083793 104 ntBASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
H2afb2S4R1M3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
H2afb2S4R1M3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm15714-201ENSMUST00000117168 250 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
H2afb2S4R1M3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm22037-201ENSMUST00000157280 296 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm28000-201ENSMUST00000184380 85 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm34073-201ENSMUST00000195736 212 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm43083-201ENSMUST00000199594 476 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm43284-201ENSMUST00000200103 253 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Gm10298-201ENSMUST00000074801 265 ntBASIC2.16□□□□□ -2.06
H2afb2S4R1M3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms