Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm24044-201ENSMUST00000083107 156 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm26327-201ENSMUST00000093724 111 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm24275-201ENSMUST00000116780 146 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm14973-201ENSMUST00000117248 255 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm16242-201ENSMUST00000117741 334 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm13085-201ENSMUST00000118356 171 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm3027-201ENSMUST00000167579 451 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm17919-201ENSMUST00000173344 312 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm28951-201ENSMUST00000190742 313 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Gm32033-201ENSMUST00000193483 339 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Snord68-201ENSMUST00000082516 86 ntBASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
H2afb1S4R1E0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm22488-201ENSMUST00000116811 127 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm13457-201ENSMUST00000117885 267 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm13355-201ENSMUST00000117996 317 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm13880-201ENSMUST00000118421 474 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm26027-201ENSMUST00000122725 268 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm16218-201ENSMUST00000155424 388 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm25339-201ENSMUST00000157458 232 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm17187-201ENSMUST00000164622 410 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm17062-201ENSMUST00000166987 461 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm9402-201ENSMUST00000196849 388 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm30534-201ENSMUST00000217928 207 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
H2afb1S4R1E0 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm24127-201ENSMUST00000104110 130 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm13806-201ENSMUST00000117822 325 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm11859-201ENSMUST00000118099 455 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm14881-201ENSMUST00000120366 372 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm13913-201ENSMUST00000121126 260 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm11254-201ENSMUST00000122368 653 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm23865-201ENSMUST00000157723 97 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm22434-201ENSMUST00000158549 122 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm25490-201ENSMUST00000158734 130 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm7925-201ENSMUST00000166690 401 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm29452-201ENSMUST00000187996 313 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm28358-202ENSMUST00000189292 223 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm28717-201ENSMUST00000189950 315 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm43355-201ENSMUST00000196541 346 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm43901-201ENSMUST00000203247 453 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm45375-201ENSMUST00000210338 280 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm45678-201ENSMUST00000210509 295 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
H2afb1S4R1E0 Gm650-201ENSMUST00000144428 1551 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms