Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm5548-201ENSMUST00000055878 397 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm25812-201ENSMUST00000082751 103 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm25856-201ENSMUST00000082786 75 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm22297-201ENSMUST00000083312 106 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Mir346-201ENSMUST00000083547 98 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm23850-201ENSMUST00000083830 169 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm24601-201ENSMUST00000157970 143 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Mir5136-201ENSMUST00000175573 76 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm16404-201ENSMUST00000177739 468 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm14598-201ENSMUST00000180109 468 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm14625-201ENSMUST00000180231 468 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm24355-201ENSMUST00000082858 122 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Snora19-201ENSMUST00000082962 132 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm23658-201ENSMUST00000083233 132 ntBASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40aQ9R1C7 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm22269-201ENSMUST00000104002 130 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm7449-201ENSMUST00000194393 663 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm22978-201ENSMUST00000082607 160 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm22299-201ENSMUST00000082663 136 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm22507-201ENSMUST00000082773 160 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm23518-201ENSMUST00000082835 153 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Prpf40aQ9R1C7 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm23231-201ENSMUST00000157299 104 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm26291-201ENSMUST00000158889 137 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Mir6345-201ENSMUST00000184286 128 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm29597-201ENSMUST00000188035 308 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Trbv18-201ENSMUST00000194256 294 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm43563-201ENSMUST00000196761 198 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Mir7682-201ENSMUST00000198467 58 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm44703-201ENSMUST00000205724 248 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Gm22970-201ENSMUST00000083304 186 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Mir370-201ENSMUST00000083499 79 ntBASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Prpf40aQ9R1C7 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Prpf40aQ9R1C7 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm13268-201ENSMUST00000117485 433 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm15268-201ENSMUST00000118845 352 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm5963-201ENSMUST00000143451 236 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm22816-201ENSMUST00000157450 117 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm23753-201ENSMUST00000157575 149 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm24014-201ENSMUST00000157728 157 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm22384-201ENSMUST00000158187 104 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm23198-201ENSMUST00000158811 91 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm7592-201ENSMUST00000160674 627 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm7582-201ENSMUST00000160831 603 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm2862-201ENSMUST00000161524 328 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm26097-201ENSMUST00000179642 93 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm44352-201ENSMUST00000196358 110 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Mir3068-202ENSMUST00000197755 79 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm23239-201ENSMUST00000083006 181 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm24453-201ENSMUST00000083346 76 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Prpf40aQ9R1C7 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms