Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.34□□□□□ -2.35
Scn11aQ9R053 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC0.34□□□□□ -2.35
Scn11aQ9R053 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
Scn11aQ9R053 Gm14360-201ENSMUST00000120670 393 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 Mir6364-201ENSMUST00000183396 86 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Scn11aQ9R053 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Scn11aQ9R053 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.34□□□□□ -2.36
Scn11aQ9R053 Gm16186-201ENSMUST00000120132 216 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm24221-201ENSMUST00000158833 313 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm16404-201ENSMUST00000177739 468 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm7958-201ENSMUST00000178255 468 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm7950-201ENSMUST00000179633 468 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm14598-201ENSMUST00000180109 468 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm14625-201ENSMUST00000180231 468 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gm37399-201ENSMUST00000195224 416 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.33□□□□□ -2.36
Scn11aQ9R053 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Scn11aQ9R053 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm8502-201ENSMUST00000185708 901 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm37098-201ENSMUST00000192290 244 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm14785-201ENSMUST00000120185 539 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm25423-201ENSMUST00000157609 107 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm25772-201ENSMUST00000158574 56 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm25138-201ENSMUST00000083248 136 ntBASIC0.32□□□□□ -2.36
Scn11aQ9R053 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Scn11aQ9R053 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.31□□□□□ -2.36
Scn11aQ9R053 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.31□□□□□ -2.36
Scn11aQ9R053 Gm44654-201ENSMUST00000208052 329 ntBASIC0.31□□□□□ -2.36
Scn11aQ9R053 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.31□□□□□ -2.36
Scn11aQ9R053 Gm7953-201ENSMUST00000168278 469 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm21815-201ENSMUST00000178213 664 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm27517-201ENSMUST00000184347 236 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm28843-201ENSMUST00000189198 678 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm29546-201ENSMUST00000191171 678 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm37713-201ENSMUST00000191746 198 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm29740-201ENSMUST00000193182 655 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm34139-201ENSMUST00000196166 294 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.3□□□□□ -2.36
Scn11aQ9R053 Mir208a-201ENSMUST00000083498 83 ntBASIC0.3□□□□□ -2.36
Scn11aQ9R053 Gm24271-201ENSMUST00000102327 111 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm26484-201ENSMUST00000158018 106 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm23933-201ENSMUST00000178405 79 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm43007-201ENSMUST00000197618 291 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm25543-201ENSMUST00000122678 312 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm25666-201ENSMUST00000157702 107 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Mir7683-201ENSMUST00000183842 61 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm29011-201ENSMUST00000191059 712 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm24622-201ENSMUST00000082619 162 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm25802-201ENSMUST00000082639 77 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Gm24256-201ENSMUST00000083696 84 ntBASIC0.29□□□□□ -2.36
Scn11aQ9R053 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC0.29□□□□□ -2.36
Scn11aQ9R053 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm26074-201ENSMUST00000104063 129 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm13992-201ENSMUST00000120558 156 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm25711-201ENSMUST00000158633 128 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm37568-201ENSMUST00000191755 364 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm42807-201ENSMUST00000200141 329 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm26224-201ENSMUST00000082506 80 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm26168-201ENSMUST00000083787 112 ntBASIC0.28□□□□□ -2.36
Scn11aQ9R053 Gm23836-201ENSMUST00000104434 129 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.27□□□□□ -2.37
Scn11aQ9R053 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm25248-201ENSMUST00000175473 98 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm27717-201ENSMUST00000183933 151 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm20058-201ENSMUST00000186939 284 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm44345-201ENSMUST00000199560 135 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm43407-201ENSMUST00000199816 317 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm12825-201ENSMUST00000120249 563 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms